| Differences in MHC class I self peptide repertoires among HLA-A2 subtypes. T Sudo, N Kamikawaji, A Kimura, Y Date, CJ Savoie, H Nakashima, ... Journal of immunology (Baltimore, Md.: 1950) 155 (10), 4749-4756, 1995 | 120 | 1995 |
| Gene network inference and visualization tools for biologists: application to new human transcriptome datasets D Hurley, H Araki, Y Tamada, B Dunmore, D Sanders, S Humphreys, ... Nucleic Acids Research 40 (6), 2377-2398, 2012 | 86 | 2012 |
| Use of gene networks from full genome microarray libraries to identify functionally relevant drug-affected genes and gene regulation cascades CJ Savoie, S Aburatani, S Watanabe, Y Eguchi, S Muta, S Imoto, ... Dna Research 10 (1), 19-25, 2003 | 81 | 2003 |
| Adaptive agent-oriented software architecture B Hodjat, CJ Savoie, M Amamiya US Patent 6,144,989, 2000 | 77 | 2000 |
| Understanding endothelial cell apoptosis: what can the transcriptome, glycome and proteome reveal? M Affara, B Dunmore, C Savoie, S Imoto, Y Tamada, H Araki, ... Philosophical Transactions of the Royal Society B: Biological Sciences 362 …, 2007 | 61 | 2007 |
| Adaptive interaction using an adaptive agent-oriented software architecture B Hodjat, CJ Savoie, M Amamiya US Patent 6,594,684, 2003 | 60 | 2003 |
| Use of gene networks for identifying and validating drug targets S Imoto, CJ Savoie, S Aburatani, S Kim, K Tashiro, S Kuhara, S Miyano Journal of bioinformatics and computational biology 1 (03), 459-474, 2003 | 47 | 2003 |
| Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis M Affara, D Sanders, H Araki, Y Tamada, BJ Dunmore, S Humphreys, ... BMC genomics 14, 1-12, 2013 | 39 | 2013 |
| Use of BONSAI decision trees for the identification of potential MHC class I peptide epitope motifs CJ Savoie, N Kamikawaji, T Sasazuki, S Kuhara Biocomputing'99, 182-189, 1999 | 36 | 1999 |
| Biological discovery using gene regulatory networks generated from multiple-disruption expression libraries S Imoto, T Goto, S Miyano, K Tashiro, M De Hoon, CJ Savoie, S Kuhara | 33* | 2003 |
| Changes at the floor of the peptide‐binding groove induce a strong preference for Proline at position 3 of the bound peptide: Molecular dynamics simulations of HLA‐A* 0217 H Toh, CJ Savoie, N Kamikawaji, S Muta, T Sasazuki, S Kuhara Biopolymers: Original Research on Biomolecules 54 (5), 318-327, 2000 | 29 | 2000 |
| Analysis of gene networks for drug target discovery and validation S Imoto, Y Tamada, CJ Savoie, S Miyanoaa Target Discovery and Validation Reviews and Protocols: Volume 1, Emerging …, 2007 | 27 | 2007 |
| Distributed parser of natural language input B Hodjat, CJ Savoie, M Amamiya US Patent 6,772,190, 2004 | 27 | 2004 |
| Computational strategy for discovering druggable gene networks from genome-wide RNA expression profiles S Imoto, Y Tamada, H Araki, K Yasuda, CG Print, SD Charnock-Jones, ... Biocomputing 2006, 559-571, 2006 | 26 | 2006 |
| Discovery of novel transcription control relationships with gene regulatory networks generated from multiple-disruption full genome expression libraries S Aburatani, K Tashiro, CJ Savoie, M Nishizawa, K Hayashi, Y Ito, S Muta, ... DNA research 10 (1), 1-8, 2003 | 23 | 2003 |
| An adaptive agent oriented software architecture B Hodjat, CJ Savoie, M Amamiya PRICAI’98: Topics in Artificial Intelligence: 5th Pacific Rim International …, 1998 | 17 | 1998 |
| System for automated reply to natural language input B Hodjat, CJ Savoie, M Amamiya US Patent 7,761,499, 2010 | 16 | 2010 |
| An HLA-binding-motif-aided peptide epitope library: a novel library design for the screening of HLA-DR4-restricted antigenic peptides recognized by CD4+ T cells T Tana, N Kamikawaji, CJ Savoie, T Sudo, Y Kinoshita, T Sasazuki Journal of human genetics 43 (1), 14-21, 1998 | 9 | 1998 |
| Unlocking the potential of microfluidics in mass spectrometry-based immunopeptidomics for tumor antigen discovery C Stutzmann, J Peng, Z Wu, C Savoie, I Sirois, P Thibault, AR Wheeler, ... Cell Reports Methods 3 (6), 2023 | 8 | 2023 |
| MHC class I bound peptides of a colon carcinoma cell line, a Ki-ras gene-targeted progeny cell line and a B cell line CJ Savoie, N Kamikawaji, T Sudo, M Furuse, S Shirasawa, T Tana, ... Cancer letters 123 (2), 193-197, 1998 | 6 | 1998 |
Seiya ImotoProfessor of Institute of Medical Science, University of TokyoVerified email at ims.u-tokyo.ac.jp
