| Single-cell RNA-seq analysis identifies markers of resistance to targeted BRAF inhibitors in melanoma cell populations YJ Ho, N Anaparthy, D Molik, G Mathew, T Aicher, A Patel, J Hicks, ... Genome research 28 (9), 1353-1363, 2018 | 83 | 2018 |
| Uncovering effects from the structure of metabarcode sequences for metagenetic and microbiome analysis DC Molik, ME Pfrender, SJ Emrich Methods and protocols 3 (1), 22, 2020 | 8 | 2020 |
| The future of post-reproductive health – The role of the Internet, the Web, information provision and access GP Cumming, E Morris, P Simpson, T French, E Kahana, JS Luciano, ... Post Reproductive Health 22 (3), 123-130, 2016 | 8 | 2016 |
| Trust and provenance in communication to ehealth consumers GP Cumming, T French, J Hogg, D McKendrick, H Gilstad, D Molik, ... The Digitization of Healthcare: New Challenges and Opportunities, 189-203, 2017 | 6 | 2017 |
| Combining natural language processing and metabarcoding to reveal pathogen-environment associations DC Molik, DA Tomlinson, S Davitt, EL Morgan, M Sisk, B Roche, N Meyers, ... Neglected Tropical Diseases, 2021 | 5 | 2021 |
| EPPS, a metabarcoding bioinformatics pipeline using Nextflow L Yiyuan, CM David, EP Michael Biodiversity Science 27 (5), 567, 2019 | 4* | 2019 |
| The effects of normalization, transformation, and rarefaction on clustering of OTU abundance DAA Tomlinson, DC Molik, ME Pfrender, SJ Emrich 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 4* | 2018 |
| Yeast grown in continuous culture systems can detect mutagens with improved sensitivity relative to the Ames test JY Ong, JT Pence, DC Molik, HAM Shepherd, HV Goodson Plos one 16 (3), e0235303, 2021 | 3 | 2021 |
| An Outsider’s Perspective on Why We Climb Mountains and Why Projects Like the i5k Matter DC Molik Journal of Insect Science 22 (4), 2, 2022 | 2 | 2022 |
| The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms K Walker, D Kalra, R Lowdon, G Chen, D Molik, DC Soto, F Dabbaghie, ... F1000 Research 11, 530, 2022 | 2 | 2022 |
| Effects from structure of Metabarcode Sequences on Lossy Analysis of Microbiome Data DC Molik, ME Pfrender, SJ Emrich 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 2 | 2018 |
| Methods in Description and Validation of Local Metagenetic Microbial Communities D Molik, ME Pfrender, S Emrich bioRxiv, 198614, 2017 | 2 | 2017 |
| Formulating ehealth utilizing an ecological understanding GP Cumming, D McKendrick, J Hogg, T French, E Kahana, D Molik, ... The Digitization of Healthcare: New Challenges and Opportunities, 81-98, 2017 | 2 | 2017 |
| FAIR Header Reference genome: a TRUSTworthy standard DCM Adam Wright, Mark D Wilkinson, Christopher Mungall, Scott Cain, Stephen ... Briefings in Bioinformatics 25 (3), 2024 | | 2024 |
| otb: Creating a HiC/HiFi Pipeline to Assemble the Prosapia bicincta Genome D Molik, A Stahlke, S Sharma, T Simmonds, R Corpuz, A Kauwe, ... EcoEvoRxiv, 2023 | | 2023 |
| Vesicular Stomatitis Virus Elicits Early Transcriptome Response in Culicoides sonorensis Cells SLP Scroggs, EJ Bird, DC Molik, D Nayduch Viruses 15 (10), 2108, 2023 | | 2023 |
| met v1: expanding on old estimations of biodiversity from eDNA with a new database framework DC Molik Database 2022, baac032, 2022 | | 2022 |
| On the Genetic Information Processing of Metabarcodes: Adding Data Utility with Provenance and Metadata DC Molik University of Notre Dame, 2021 | | 2021 |
| RDA COVID-19 Recommendations and Guidelines on Data Sharing RDA COVID-19 Working Group Research Data Alliance, 2020 | | 2020 |
| Data mining for the prioritization of American insecta genomes DC Molik, S Richards, M Pfrender Entomology 2019, 2019 | | 2019 |
Michael PfrenderProfessor, University of Notre DameVerified email at nd.edu
