| TNT, a free program for phylogenetic analysis PA Goloboff, JS Farris, KC Nixon Cladistics 24 (5), 774-786, 2008 | 5753 | 2008 |
| Testing significance of incongruence JS Farris, M Kallersjo, AG Kluge, C Bult Elsevier, 1994 | 4601 | 1994 |
| Quantitative phyletics and the evolution of anurans AG Kluge, JS Farris Systematic Biology 18 (1), 1-32, 1969 | 3961 | 1969 |
| The retention index and the rescaled consistency index JS Farris Cladistics 5 (4), 417-419, 1989 | 2122 | 1989 |
| Methods for computing Wagner trees JS Farris Systematic Biology 19 (1), 83-92, 1970 | 2096 | 1970 |
| Parsimony jackknifing outperforms neighbor-joining JS Farris, VA Albert, M Källersjö, D Lipscomb, AG Kluge Cladistics 12 (2), 99-124, 1996 | 1815 | 1996 |
| A successive approximations approach to character weighting JS Farris Systematic zoology 18 (4), 374-385, 1969 | 1676 | 1969 |
| Estimating phylogenetic trees from distance matrices JS Farris The American Naturalist 106 (951), 645-668, 1972 | 1672 | 1972 |
| Angiosperm phylogeny inferred from 18S rDNA, rbcL, and atpB sequences DE Soltis, PS Soltis, MW Chase, ME Mort, DC Albach, M Zanis, ... Botanical Journal of the Linnean Society 133 (4), 381-461, 2000 | 1664 | 2000 |
| Hennig86, version 1.5 JS Farris Distributed by the author, Port Jefferson Station, NY, 1988 | 1468* | 1988 |
| Constructing a significance test for incongruence JS Farris, M Kallersjo, AG Kluge, C Bult Systematic biology 44 (4), 570-572, 1995 | 1395 | 1995 |
| The logical basis of phylogenetic analysis J Farris na 36, 7, 1983 | 1384 | 1983 |
| tnt PA Goloboff, JS Farris, KC Nixon Cladistics 20, 84, 2004 | 1125 | 2004 |
| Improvements to resampling measures of group support PA Goloboff, JS Farris, M Källersjö, B Oxelman, MJ Ramıacute; rez, ... Cladistics 19 (4), 324-332, 2003 | 952 | 2003 |
| The implications of congruence in Menidia MF Mickevich, JS Farris Systematic Zoology 30 (3), 351-370, 1981 | 717 | 1981 |
| Phylogenetic analysis under Dollo's Law JS Farris Systematic Biology 26 (1), 77-88, 1977 | 546 | 1977 |
| A numerical approach to phylogenetic systematics JS Farris, AG Kluge, MJ Eckardt Systematic Zoology 19 (2), 172-189, 1970 | 503 | 1970 |
| Skewness and permutation M Källersjö, JS Farris, AG Kluge, C Bult Cladistics 8 (3), 275-287, 1992 | 417 | 1992 |
| The retention index and homoplasy excess JS Farris Systematic Zoology 38 (4), 406-407, 1989 | 413 | 1989 |
| Methods for quick consensus estimation PA Goloboff, JS Farris Cladistics 17 (1), S26-S34, 2001 | 399 | 2001 |
