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Raul Mendez Giraldez
Raul Mendez Giraldez
National Institute of Environmental Health Sciences (NIEHS)
Verified email at nih.gov
Title
Cited by
Cited by
Year
Assessment of blind predictions of protein–protein interactions: current status of docking methods
R Méndez, R Leplae, L De Maria, SJ Wodak
Proteins: Structure, Function, and Bioinformatics 52 (1), 51-67, 2003
4722003
Docking and scoring protein complexes: CAPRI 3rd Edition
MF Lensink, R Méndez, SJ Wodak
Proteins: Structure, Function, and Bioinformatics 69 (4), 704-718, 2007
4242007
Assessment of CAPRI predictions in rounds 3–5 shows progress in docking procedures
R Méndez, R Leplae, MF Lensink, SJ Wodak
Proteins: Structure, Function, and Bioinformatics 60 (2), 150-169, 2005
4092005
The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States
J Sequeira-Mendes, I Aragüez, R Peiró, R Mendez-Giraldez, X Zhang, ...
The Plant Cell 26 (6), 2351-2366, 2014
2962014
Prediction of protein–protein interactions: the CAPRI experiment, its evaluation and implications
SJ Wodak, R Méndez
Current opinion in structural biology 14 (2), 242-249, 2004
1762004
Torsional network model: normal modes in torsion angle space better correlate with conformation changes in proteins
R Mendez, U Bastolla
Physical review letters 104 (22), 228103, 2010
912010
Methylome-wide association study provides evidence of particulate matter air pollution-associated DNA methylation
R Gondalia, A Baldassari, KM Holliday, AE Justice, R Méndez-Giráldez, ...
Environment international 132, 104723, 2019
702019
Mutation bias favors protein folding stability in the evolution of small populations
R Mendez, M Fritsche, M Porto, U Bastolla
PLoS Computational Biology 6 (5), e1000767, 2010
462010
Quantifying the evolutionary divergence of protein structures: the role of function change and function conservation
A Pascual‐García, D Abia, R Méndez, GS Nido, U Bastolla
Proteins: Structure, Function, and Bioinformatics 78 (1), 181-196, 2010
452010
In vitro susceptibilities of clinical yeast isolates to the new antifungal eberconazole compared with their susceptibilities to clotrimazole and ketoconazole
JM Torres-Rodríguez, R Mendez, O López-Jodra, Y Morera, M Espasa, ...
Antimicrobial agents and chemotherapy 43 (5), 1258-1259, 1999
371999
A multi-omic single-cell landscape of human gynecologic malignancies
MJ Regner, K Wisniewska, S Garcia-Recio, A Thennavan, ...
Molecular cell 81 (23), 4924-4941. e10, 2021
352021
Recognition-induced conformational changes in protein-protein docking
MF Lensink, R Mendez
Current pharmaceutical biotechnology 9 (2), 77-86, 2008
332008
Regulation of ionotropic glutamate receptor subunits in different rat brain areas by a preferential sigma1 receptor ligand and potential atypical antipsychotic
X Guitart, R Méndez, S Ovalle, F Andreu, A Carceller, AJ Farré, ...
Neuropsychopharmacology 23 (5), 539-546, 2000
302000
Genome-wide association study of heart rate and its variability in Hispanic/Latino cohorts
KF Kerr, CL Avery, HJ Lin, LM Raffield, QS Zhang, BL Browning, ...
Heart rhythm 14 (11), 1675-1684, 2017
282017
GWAS of the electrocardiographic QT interval in Hispanics/Latinos generalizes previously identified loci and identifies population-specific signals
R Méndez-Giráldez, SM Gogarten, JE Below, J Yao, AA Seyerle, ...
Scientific reports 7 (1), 17075, 2017
272017
Protein disorder in the centrosome correlates with complexity in cell types number
GS Nido, R Méndez, A Pascual-García, D Abia, U Bastolla
Molecular BioSystems 8 (1), 353-367, 2012
272012
Structure and non-structure of centrosomal proteins
HG Dos Santos, D Abia, R Janowski, G Mortuza, MG Bertero, M Boutin, ...
PLoS One 8 (5), e62633, 2013
252013
Recognizing protein–protein interfaces with empirical potentials and reduced amino acid alphabets
G Launay, R Mendez, S Wodak, T Simonson
BMC bioinformatics 8, 1-22, 2007
242007
Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication origins
J Sequeira-Mendes, Z Vergara, R Peiró, J Morata, I Aragüez, C Costas, ...
Genome research 29 (5), 784-797, 2019
202019
Differential gene regulatory pattern in the human brain from schizophrenia using transcriptomic-causal network
A Yazdani, R Mendez-Giraldez, A Yazdani, MR Kosorok, P Roussos
BMC bioinformatics 21, 1-19, 2020
182020
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