| Spatiotemporal dissection of the cell cycle with single-cell proteogenomics D Mahdessian, AJ Cesnik, C Gnann, F Danielsson, L Stenström, M Arif, ... Nature 590 (7847), 649-654, 2021 | 123 | 2021 |
| Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection H Song, EE Giorgi, VV Ganusov, F Cai, G Athreya, H Yoon, O Carja, ... Nature communications 9 (1), 1928, 2018 | 99 | 2018 |
| Trends in DNA methylation with age replicate across diverse human populations S Gopalan, O Carja, M Fagny, E Patin, JW Myrick, LM McEwen, SM Mah, ... Genetics 206 (3), 1659-1674, 2017 | 80 | 2017 |
| Evolution in changing environments: Modifiers of mutation, recombination, and migration O Carja, U Liberman, MW Feldman Proceedings of the National Academy of Sciences 111 (50), 17935-17940, 2014 | 73 | 2014 |
| Worldwide patterns of human epigenetic variation O Carja, JL MacIsaac, SM Mah, BM Henn, MS Kobor, MW Feldman, ... Nature Ecology & Evolution 1, 1577–1583, 2017 | 57 | 2017 |
| Riboviz: analysis and visualization of ribosome profiling datasets O Carja, T Xing, EWJ Wallace, JB Plotkin, P Shah BMC bioinformatics 18, 1-4, 2017 | 38 | 2017 |
| The evolutionary advantage of heritable phenotypic heterogeneity O Carja, JB Plotkin Scientific reports 7 (1), 5090, 2017 | 31 | 2017 |
| An equilibrium for phenotypic variance in fluctuating environments owing to epigenetics O Carja, MW Feldman Journal of The Royal Society Interface 9 (69), 613-623, 2012 | 25 | 2012 |
| Evolutionary rescue through partly heritable phenotypic variability O Carja, JB Plotkin Genetics 211 (3), 977-988, 2019 | 24 | 2019 |
| The evolution of phenotypic switching in subdivided populations O Carja, U Liberman, MW Feldman Genetics 196 (4), 1185-1197, 2014 | 23 | 2014 |
| Evolution with stochastic fitnesses: A role for recombination O Carja, U Liberman, MW Feldman Theoretical Population Biology 86, 29-42, 2013 | 14 | 2013 |
| CpG-creating mutations are costly in many human viruses VR Caudill, S Qin, R Winstead, J Kaur, K Tisthammer, EG Pineda, C Solis, ... Evolutionary ecology 34, 339-359, 2020 | 13 | 2020 |
| The evolutionary advantage of cultural memory on heterogeneous contact networks O Carja, N Creanza Theoretical Population Biology 129, 118-125, 2019 | 11 | 2019 |
| The role of migration in the evolution of phenotypic switching O Carja, RE Furrow, MW Feldman Proceedings of the Royal Society B: Biological Sciences 281 (1794), 20141677, 2014 | 11 | 2014 |
| Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection. Nat Commun 9: 1928 H Song, EE Giorgi, VV Ganusov, F Cai, G Athreya, H Yoon, O Carja, ... | 9 | 2018 |
| Furrow, and Marcus W Feldman. The role of migration in the evolution of phenotypic switching O Carja, E Robert Proceedings of the Royal Society of London B: Biological Sciences 281, 2014, 1794 | 7 | 1794 |
| A theory of evolutionary dynamics on any complex spatial structure YP Kuo, CN Arrieta, O Carja BioRxiv, 2021.02. 07.430151, 2021 | 6 | 2021 |
| Agent-based model of tasmanian devils examines spread of devil facial tumor disease due to road construction G Fay, M Olsen, J Gran, A Johnson, V Weinberger, O Carja Proceedings of the International Conference on Complex Systems, 2011 | 4 | 2011 |
| Multiple solutions for nonlinear elliptic systems with changing-sign weights H Chen, J Yang | 3 | 2009 |
| Evolutionary graph theory beyond pairwise interactions: Higher-order network motifs shape times to fixation in structured populations YP Kuo, O Carja PLOS Computational Biology 20 (3), e1011905, 2024 | 2 | 2024 |
