| Network inference in systems biology: recent developments, challenges, and applications MM Saint-Antoine, A Singh Current opinion in biotechnology 63, 89-98, 2020 | 69 | 2020 |
| Gene networks with transcriptional bursting recapitulate rare transient coordinated high expression states in cancer L Schuh, M Saint-Antoine, EM Sanford, BL Emert, A Singh, C Marr, A Raj, ... Cell systems 10 (4), 363-378. e12, 2020 | 51 | 2020 |
| Disrupting cellular memory to overcome drug resistance G Harmange, RAR Hueros, DL Schaff, B Emert, M Saint-Antoine, LC Kim, ... Nature communications 14 (1), 7130, 2023 | 18 | 2023 |
| Fluctuation-based approaches to infer kinetics of cell-state switching M Saint-Antoine, R Grima, A Singh 2022 IEEE 61st Conference on Decision and Control (CDC), 3878-3883, 2022 | 11* | 2022 |
| A scalable, open-source implementation of a large-scale mechanistic model for single cell proliferation and death signaling C Erdem, A Mutsuddy, EM Bensman, WB Dodd, MM Saint-Antoine, ... Nature communications 13 (1), 1-18, 2022 | 11 | 2022 |
| Evaluating pruning methods in gene network inference MM Saint-Antoine, A Singh 2019 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2019 | 10 | 2019 |
| Optimal scheduling of therapy to delay cancer drug resistance S Paryad-Zanjani, MM Saint-Antoine, A Singh IFAC-PapersOnLine 54 (15), 239-244, 2021 | 7 | 2021 |
| Probing transient memory of cellular states using single-cell lineages A Singh, M Saint-Antoine Frontiers in microbiology 13, 1050516, 2023 | 6 | 2023 |
| Limits on inferring gene regulatory networks from single-cell measurements of unstable mRNA levels T Mahajan, M Saint-Antoine, RD Dar, A Singh 2022 IEEE 61st Conference on Decision and Control (CDC), 3884-3889, 2022 | 5* | 2022 |
| Moment-based estimation of state-switching rates in cell populations M Saint-Antoine, A Singh bioRxiv, 2022.01. 06.475260, 2022 | 3 | 2022 |
| Insights on the control of yeast single-cell growth variability by members of the Trehalose Phosphate Synthase (TPS) complex S Arabaciyan, M Saint-Antoine, C Maugis-Rabusseau, JM François, ... Frontiers in Cell and Developmental Biology 9, 607628, 2021 | 3 | 2021 |
| Limits on inferring gene regulatory networks subjected to different noise mechanisms M Saint-Antoine, A Singh bioRxiv, 2023.01. 23.525259, 2023 | 2 | 2023 |
| Benchmarking gene regulatory network inference methods on simulated and experimental data M Saint-Antoine, A Singh bioRxiv, 2023 | 1 | 2023 |
| Estimating rates of switching between cell states using a single time point measurement MM Saint-Antoine, A Singh IFAC-PapersOnLine 55 (23), 80-85, 2022 | 1 | 2022 |
| The transcription factor ATML1 maintains giant cell identity by inducing synthesis of its own (very) long-chain fatty acid-containing ligands BVL Vadde, NJ Russell, SR Bagde, B Askey, MM Saint-Antoine, ... bioRxiv, 2024.03. 14.584694, 2024 | | 2024 |
| Computational Tools for Modeling Heterogeneity Within Cell Populations M Saint-Antoine University of Delaware, 2023 | | 2023 |
| Identification of Heritable Biomarkers That Characterize Resistance to Stress and Improved Productivity in CHO Cell Line Development S Grissom, M Saint-Antoine, A Singh, M Blenner 2022 AIChE Annual Meeting, 2022 | | 2022 |
