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Richard Baran
Richard Baran
Verified email at lbl.gov
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Differential metabolomics reveals ophthalmic acid as an oxidative stress biomarker indicating hepatic glutathione consumption
T Soga, R Baran, M Suematsu, Y Ueno, S Ikeda, T Sakurakawa, Y Kakazu, ...
Journal of Biological Chemistry 281 (24), 16768-16776, 2006
8012006
MathDAMP: a package for differential analysis of metabolite profiles
R Baran, H Kochi, N Saito, M Suematsu, T Soga, T Nishioka, M Robert, ...
BMC bioinformatics 7, 1-9, 2006
2042006
Exometabolite niche partitioning among sympatric soil bacteria
R Baran, EL Brodie, J Mayberry-Lewis, E Hummel, UN Da Rocha, ...
Nature communications 6 (1), 8289, 2015
1892015
Belowground response to drought in a tropical forest soil. I. Changes in microbial functional potential and metabolism
NJ Bouskill, TE Wood, R Baran, J Zhou, JDV Nostrand, P Nico, ...
Frontiers in microbiology 7, 183795, 2016
1442016
Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in microalgae
CY Ngan, CH Wong, C Choi, Y Yoshinaga, K Louie, J Jia, C Chen, ...
Nature Plants 1 (8), 1-12, 2015
1122015
Metabolomics approach for enzyme discovery
N Saito, M Robert, S Kitamura, R Baran, T Soga, H Mori, T Nishioka, ...
Journal of Proteome Research 5 (8), 1979-1987, 2006
1042006
Metabolites associated with adaptation of microorganisms to an acidophilic, metal-rich environment identified by stable-isotope-enabled metabolomics
AC Mosier, NB Justice, BP Bowen, R Baran, BC Thomas, TR Northen, ...
MBio 4 (2), 10.1128/mbio. 00484-12, 2013
872013
Belowground response to drought in a tropical forest soil. II. Change in microbial function impacts carbon composition
NJ Bouskill, TE Wood, R Baran, Z Hao, PS Nico, HY Holman, WL Silver, ...
Frontiers in microbiology 7, 183812, 2016
782016
Metabolite Identification in Synechococcus sp. PCC 7002 Using Untargeted Stable Isotope Assisted Metabolite Profiling
R Baran, BP Bowen, NJ Bouskill, EL Brodie, SM Yannone, TR Northen
Analytical chemistry 82 (21), 9034-9042, 2010
752010
Mass spectrometry based metabolomics and enzymatic assays for functional genomics
R Baran, W Reindl, TR Northen
Current opinion in microbiology 12 (5), 547-552, 2009
722009
Functional genomics of novel secondary metabolites from diverse cyanobacteria using untargeted metabolomics
R Baran, NN Ivanova, N Jose, F Garcia-Pichel, NC Kyrpides, M Gugger, ...
Marine drugs 11 (10), 3617-3631, 2013
662013
Untargeted metabolic footprinting reveals a surprising breadth of metabolite uptake and release by Synechococcus sp. PCC 7002
R Baran, BP Bowen, TR Northen
Molecular BioSystems 7 (12), 3200-3206, 2011
582011
Differential metabolomics software for capillary electrophoresis-mass spectrometry data analysis
M Sugimoto, A Hirayama, T Ishikawa, M Robert, R Baran, K Uehara, ...
Metabolomics 6, 27-41, 2010
582010
Metabolic footprinting of mutant libraries to map metabolite utilization to genotype
R Baran, BP Bowen, MN Price, AP Arkin, AM Deutschbauer, TR Northen
ACS chemical biology 8 (1), 189-199, 2013
372013
Ping-pong character of nasturtium-seed xyloglucan endotransglycosylase (XET) reaction
R Baran, Z Sulová, E Stratilova, V Farkas
General Physiology and Biophysics 19 (4), 427-440, 2000
282000
Exometabolite niche partitioning among sympatric soil bacteria. Nat Commun 6: 8289
R Baran, EL Brodie, J Mayberry-Lewis, E Hummel, UN Da Rocha, ...
272015
Extensive Turnover of Compatible Solutes in Cyanobacteria Revealed by Deuterium Oxide (D2O) Stable Isotope Probing
R Baran, R Lau, BP Bowen, S Diamond, N Jose, F Garcia-Pichel, ...
ACS chemical biology 12 (3), 674-681, 2017
242017
Web of microbes (WoM): a curated microbial exometabolomics database for linking chemistry and microbes
SM Kosina, AM Greiner, RK Lau, S Jenkins, R Baran, BP Bowen, ...
BMC microbiology 18, 1-10, 2018
222018
Untargeted metabolomics suffers from incomplete raw data processing
R Baran
Metabolomics 13, 1-4, 2017
222017
Release of complexed xyloglucan endotransglycosylase (XET) from plant cell walls by a transglycosylation reaction with xyloglucan-derived oligosaccharides
Z Sulová, R Baran, V Farkaš
Plant Physiology and Biochemistry 39 (11), 927-932, 2001
212001
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Articles 1–20