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Jyoti Chattopadhyaya
Jyoti Chattopadhyaya
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Year
A large-scale chemical modification screen identifies design rules to generate siRNAs with high activity, high stability and low toxicity
JB Bramsen, MB Laursen, AF Nielsen, TB Hansen, C Bus, N Langkjær, ...
Nucleic acids research 37 (9), 2867-2881, 2009
4312009
How do the gauche and anomeric effects drive the pseudorotational equilibrium of the pentofuranose moiety of nucleosides?
J Plavec, W Tong, J Chattopadhyaya
Journal of the American Chemical Society 115 (21), 9734-9746, 1993
2441993
Structure and toxicity of a peptide hepatotoxin from the cyanobacterium Oscillatoria agardhii
JAO Meriluoto, A Sandström, JE Eriksson, G Remaud, AG Graig, ...
Toxicon 27 (9), 1021-1034, 1989
2041989
A screen of chemical modifications identifies position-specific modification by UNA to most potently reduce siRNA off-target effects
JB Bramsen, MM Pakula, TB Hansen, C Bus, N Langkjær, D Odadzic, ...
Nucleic acids research 38 (17), 5761-5773, 2010
1942010
A new generalized Karplus-type equation relating vicinal proton-fluorine coupling constants to H− C− C− F torsion angles
C Thibaudeau, J Plavec, J Chattopadhyaya
The Journal of Organic Chemistry 63 (15), 4967-4984, 1998
1821998
A critical survey of the structure-function of the antisense oligo/RNA heteroduplex as substrate for RNase H
E Zamaratski, PI Pradeepkumar, J Chattopadhyaya
Journal of biochemical and biophysical methods 48 (3), 189-208, 2001
1812001
Design, synthesis and biological evaluation of novel triazole, urea and thiourea derivatives of quinoline against Mycobacterium tuberculosis
RS Upadhayaya, GM Kulkarni, NR Vasireddy, JK Vandavasi, SS Dixit, ...
Bioorganic & medicinal chemistry 17 (13), 4681-4692, 2009
1732009
Design, synthesis, biological evaluation and molecular modelling studies of novel quinoline derivatives against Mycobacterium tuberculosis
RS Upadhayaya, JK Vandavasi, NR Vasireddy, V Sharma, SS Dixit, ...
Bioorganic & medicinal chemistry 17 (7), 2830-2841, 2009
1702009
Allele-Selective Inhibition of Mutant Huntingtin Expression with Antisense Oligonucleotides Targeting the Expanded CAG Repeat
KT Gagnon, HM Pendergraff, GF Deleavey, EE Swayze, P Potier, ...
Biochemistry 49 (47), 10166-10178, 2010
1612010
Novel quinoline and naphthalene derivatives as potent antimycobacterial agents
RS Upadhayaya, JK Vandavasi, RA Kardile, SV Lahore, SS Dixit, ...
European journal of medicinal chemistry 45 (5), 1854-1867, 2010
1442010
Stereoelectronic effects in nucleosides and nucleotides and their structural implications
C Thibaudeau, J Chattopadhyaya
Uppsala University Press, 1999
1191999
How does the electronegativity of the substituent dictate the strength of the gauche effect?
C Thibaudeau, J Plavec, N Garg, A Papchikhin, J Chattopadhyaya
Journal of the American Chemical Society 116 (9), 4038-4043, 1994
1171994
Single-stranded adenine-rich DNA and RNA retain structural characteristics of their respective double-stranded conformations and show directional differences in stacking pattern
J Isaksson, S Acharya, J Barman, P Cheruku, J Chattopadhyaya
Biochemistry 43 (51), 15996-16010, 2004
1132004
How Does the 2'-Hydroxy Group Drive the Pseudorotational Equilibrium in Nucleoside and Nucleotide by the Tuning of the 3'-Gauche Effect?
J Plavec, C Thibaudeau, J Chattopadhyaya
Journal of the American Chemical Society 116 (15), 6558-6560, 1994
1121994
The pKa's of 2‘-Hydroxyl Group in Nucleosides and Nucleotides
I Velikyan, S Acharya, A Trifonova, A Földesi, J Chattopadhyaya
Journal of the American Chemical Society 123 (12), 2893-2894, 2001
1112001
Rapid and quantitative recovery of DNA fragments from gels by displacement electrophoresis (isotachophoresis)
LG Öfverstedt, K Hammarström, N Balgobin, S Hjertén, U Pettersson, ...
Biochimica et Biophysica Acta (BBA)-Gene Structure and Expression 782 (2 …, 1984
1081984
Inhibition of the reverse transcriptase from HIV by 3′-azido-3′-deoxythymidine triphosphate and its threo analogue
L Vrang, H Bazin, G Remaud, J Chattopadhyaya, B Öberg
Antiviral research 7 (3), 139-149, 1987
1061987
Chemical synthesis of a tridecanucleoside dodecaphosphate sequence of SV40 DNA
JB Chattopadhyaya, CB Reese
Nucleic Acids Research 8 (9), 2039-2053, 1980
1011980
Measurement of Nucleobase pKa Values in Model Mononucleotides Shows RNA−RNA Duplexes To Be More Stable than DNA−DNA Duplexes
P Acharya, P Cheruku, S Chatterjee, S Acharya, J Chattopadhyaya
Journal of the American Chemical Society 126 (9), 2862-2869, 2004
992004
Five- and Six-Membered Conformationally Locked 2‘,4‘-Carbocyclic ribo-Thymidines:  Synthesis, Structure, and Biochemical Studies
P Srivastava, J Barman, W Pathmasiri, O Plashkevych, M Wenska, ...
Journal of the American Chemical Society 129 (26), 8362-8379, 2007
972007
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