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Ogün Adebali
Ogün Adebali
Associate Professor, Sabanci University
Verified email at sabanciuniv.edu - Homepage
Title
Cited by
Cited by
Year
Differential damage and repair of DNA-adducts induced by anti-cancer drug cisplatin across mouse organs
A Yimit, O Adebali, A Sancar, Y Jiang
Nature communications 10 (1), 309, 2019
1742019
Cache domains that are homologous to, but different from PAS domains comprise the largest superfamily of extracellular sensors in prokaryotes
AA Upadhyay, AD Fleetwood, O Adebali, RD Finn, IB Zhulin
PLoS computational biology 12 (4), e1004862, 2016
1672016
Dynamic maps of UV damage formation and repair for the human genome
J Hu, O Adebali, S Adar, A Sancar
Proceedings of the National Academy of Sciences 114 (26), 6758-6763, 2017
1642017
MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems
VM Gumerov, DR Ortega, O Adebali, LE Ulrich, IB Zhulin
Nucleic acids research 48 (D1), D459-D464, 2020
1452020
Cisplatin-DNA adduct repair of transcribed genes is controlled by two circadian programs in mouse tissues
Y Yang, O Adebali, G Wu, CP Selby, YY Chiou, N Rashid, J Hu, ...
Proceedings of the National Academy of Sciences 115 (21), E4777-E4785, 2018
952018
Human genome-wide repair map of DNA damage caused by the cigarette smoke carcinogen benzo [a] pyrene
W Li, J Hu, O Adebali, S Adar, Y Yang, YY Chiou, A Sancar
Proceedings of the National Academy of Sciences 114 (26), 6752-6757, 2017
942017
Genome-wide transcription-coupled repair in Escherichia coli is mediated by the Mfd translocase
O Adebali, YY Chiou, J Hu, A Sancar, CP Selby
Proceedings of the National Academy of Sciences 114 (11), E2116-E2125, 2017
872017
Molecular mechanisms and genomic maps of DNA excision repair in Escherichia coli and humans
J Hu, CP Selby, S Adar, O Adebali, A Sancar
Journal of Biological Chemistry 292 (38), 15588-15597, 2017
862017
CDvist: a webserver for identification and visualization of conserved domains in protein sequences
O Adebali, DR Ortega, IB Zhulin
Bioinformatics 31 (9), 1475-1477, 2015
622015
Genome-wide mapping of nucleotide excision repair with XR-seq
J Hu, W Li, O Adebali, Y Yang, O Oztas, CP Selby, A Sancar
Nature protocols 14 (1), 248-282, 2019
612019
Single-nucleotide resolution dynamic repair maps of UV damage in Saccharomyces cerevisiae genome
W Li, O Adebali, Y Yang, CP Selby, A Sancar
Proceedings of the National Academy of Sciences 115 (15), E3408-E3415, 2018
512018
Genome-wide excision repair in Arabidopsis is coupled to transcription and reflects circadian gene expression patterns
O Oztas, CP Selby, A Sancar, O Adebali
Nature communications 9 (1), 1503, 2018
492018
Mfd translocase is necessary and sufficient for transcription-coupled repair in Escherichia coli
O Adebali, A Sancar, CP Selby
Journal of Biological Chemistry 292 (45), 18386-18391, 2017
462017
The mutation profile of SARS-CoV-2 is primarily shaped by the host antiviral defense
C Azgari, Z Kilinc, B Turhan, D Circi, O Adebali
Viruses 13 (3), 394, 2021
402021
Establishing the precise evolutionary history of a gene improves prediction of disease-causing missense mutations
O Adebali, AO Reznik, DS Ory, IB Zhulin
Genetics in Medicine 18 (10), 1029-1036, 2016
362016
Phylogenetic Analysis of SARS-CoV-2 Genomes in Turkey
O Adebali, A Bircan, D Circi, B Islek, Z Kilinc, B Selcuk, B Turhan
Turkish Journal of Biology 44 (3), 146-156, 2020
242020
Nucleotide excision repair capacity increases during differentiation of human embryonic carcinoma cells into neurons and muscle cells
W Li, W Liu, A Kakoki, R Wang, O Adebali, Y Jiang, A Sancar
Journal of Biological Chemistry 294 (15), 5914-5922, 2019
182019
SURF1 related Leigh syndrome: Clinical and molecular findings of 16 patients from Turkey
M Kose, E Canda, M Kagnici, A Aykut, O Adebali, A Durmaz, A Bircan, ...
Molecular Genetics and Metabolism Reports 25, 100657, 2020
162020
Aquerium: A web application for comparative exploration of domain‐based protein occurrences on the taxonomically clustered genome tree
O Adebali, IB Zhulin
Proteins: Structure, Function, and Bioinformatics 85 (1), 72-77, 2017
142017
The utility of next-generation sequencing technologies in diagnosis of Mendelian mitochondrial diseases and reflections on clinical spectrum
M Kose, E Isik, A Aykut, A Durmaz, E Kose, M Ersoy, G Diniz, O Adebali, ...
Journal of Pediatric Endocrinology and Metabolism 34 (4), 417-430, 2021
102021
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