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Xihao Li
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Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale
X Li, Z Li, H Zhou, SM Gaynor, Y Liu, H Chen, R Sun, R Dey, DK Arnett, ...
Nature genetics 52 (9), 969-983, 2020
1602020
Association between smoking history and tumor mutation burden in advanced non–small cell lung cancer
X Wang, B Ricciuti, T Nguyen, X Li, MS Rabin, MM Awad, X Lin, ...
Cancer research 81 (9), 2566-2573, 2021
872021
Genetic overlap of chronic obstructive pulmonary disease and cardiovascular disease-related traits: a large-scale genome-wide cross-trait analysis
Z Zhu, X Wang, X Li, Y Lin, S Shen, CL Liu, BD Hobbs, K Hasegawa, ...
Respiratory research 20, 1-14, 2019
842019
Shared genetic architecture between metabolic traits and Alzheimer’s disease: a large-scale genome-wide cross-trait analysis
Z Zhu, Y Lin, X Li, JA Driver, L Liang
Human genetics 138, 271-285, 2019
542019
Dynamic scan procedure for detecting rare-variant association regions in whole-genome sequencing studies
Z Li, X Li, Y Liu, J Shen, H Chen, H Zhou, AC Morrison, E Boerwinkle, ...
The American Journal of Human Genetics 104 (5), 802-814, 2019
512019
A framework for detecting noncoding rare-variant associations of large-scale whole-genome sequencing studies
Z Li, X Li, H Zhou, SM Gaynor, MS Selvaraj, T Arapoglou, C Quick, Y Liu, ...
Nature methods 19 (12), 1599-1611, 2022
442022
FAVOR: functional annotation of variants online resource and annotator for variation across the human genome
H Zhou, T Arapoglou, X Li, Z Li, X Zheng, J Moore, A Asok, S Kumar, ...
Nucleic acids research 51 (D1), D1300-D1311, 2023
412023
Cross-ancestry genome-wide meta-analysis of 61,047 cases and 947,237 controls identifies new susceptibility loci contributing to lung cancer
J Byun, Y Han, Y Li, J Xia, E Long, J Choi, X Xiao, M Zhu, W Zhou, R Sun, ...
Nature genetics 54 (8), 1167-1177, 2022
412022
Principles and methods of in-silico prioritization of non-coding regulatory variants
PH Lee, C Lee, X Li, B Wee, T Dwivedi, M Daly
Human genetics 137, 15-30, 2018
412018
Whole genome sequence analysis of blood lipid levels in> 66,000 individuals
MS Selvaraj, X Li, Z Li, A Pampana, DY Zhang, J Park, S Aslibekyan, ...
Nature communications 13 (1), 5995, 2022
342022
Powerful, scalable and resource-efficient meta-analysis of rare variant associations in large whole genome sequencing studies
X Li, C Quick, H Zhou, SM Gaynor, Y Liu, H Chen, MS Selvaraj, R Sun, ...
Nature genetics 55 (1), 154-164, 2023
212023
Spatiotemporal patterns of neuronal subtype genesis suggest hierarchical development of retinal diversity
ER West, SW Lapan, CH Lee, KM Kajderowicz, X Li, CL Cepko
Cell Reports 38 (1), 2022
192022
Target population statistical inference with data integration across multiple sources—an approach to mitigate information shortage in rare disease clinical trials
X Li, Y Song
Statistics in Biopharmaceutical Research 12 (3), 322-333, 2020
182020
A multi-dimensional integrative scoring framework for predicting functional variants in the human genome
X Li, G Yung, H Zhou, R Sun, Z Li, K Hou, MJ Zhang, Y Liu, T Arapoglou, ...
The American Journal of Human Genetics 109 (3), 446-456, 2022
172022
STAAR workflow: a cloud-based workflow for scalable and reproducible rare variant analysis
SM Gaynor, KE Westerman, LL Ackovic, X Li, Z Li, AK Manning, ...
Bioinformatics 38 (11), 3116-3117, 2022
112022
Surgical survival benefits with different metastatic patterns for stage IV extrathoracic metastatic non-small cell lung cancer: a SEER-based study
C Chao, Y Qian, X Li, C Sang, B Wang, X Zhang
Technology in cancer research & treatment 20, 15330338211033064, 2021
82021
Integration of multiomic annotation data to prioritize and characterize inflammation and immune‐related risk variants in squamous cell lung cancer
R Sun, M Xu, X Li, S Gaynor, H Zhou, Z Li, Y Bossé, S Lam, MS Tsao, ...
Genetic epidemiology 45 (1), 99-114, 2021
82021
Whole-genome sequencing analysis of human metabolome in multi-ethnic populations
EV Feofanova, MR Brown, T Alkis, AM Manuel, X Li, UA Tahir, Z Li, ...
Nature communications 14 (1), 3111, 2023
62023
A versatile toolkit for molecular QTL mapping and meta-analysis at scale
C Quick, L Guan, Z Li, X Li, R Dey, Y Liu, L Scott, X Lin
Biorxiv, 2020.12. 18.423490, 2020
52020
Are per capita carbon emissions predictable across countries?
CK Lin, T Chen, X Li, N De Marcellis-Warin, C Zigler, DC Christiani
Journal of environmental management 237, 569-575, 2019
52019
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