| High-fat diet determines the composition of the murine gut microbiome independently of obesity MA Hildebrandt, C Hoffmann, SA Sherrill–Mix, SA Keilbaugh, M Hamady, ... Gastroenterology 137 (5), 1716-1724. e2, 2009 | 1777 | 2009 |
| Comparison of placenta samples with contamination controls does not provide evidence for a distinct placenta microbiota AP Lauder, AM Roche, S Sherrill-Mix, A Bailey, AL Laughlin, K Bittinger, ... Microbiome 4, 1-11, 2016 | 523 | 2016 |
| Optimizing methods and dodging pitfalls in microbiome research D Kim, CE Hofstaedter, C Zhao, L Mattei, C Tanes, E Clarke, A Lauder, ... Microbiome 5, 1-14, 2017 | 507 | 2017 |
| U1 snRNP determines mRNA length and regulates isoform expression MG Berg, LN Singh, I Younis, Q Liu, AM Pinto, D Kaida, Z Zhang, S Cho, ... Cell 150 (1), 53-64, 2012 | 487 | 2012 |
| Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA BJ Kelly, R Gross, K Bittinger, S Sherrill-Mix, JD Lewis, RG Collman, ... Bioinformatics 31 (15), 2461-2468, 2015 | 373 | 2015 |
| Lack of detection of a human placenta microbiome in samples from preterm and term deliveries JS Leiby, K McCormick, S Sherrill-Mix, EL Clarke, LR Kessler, LJ Taylor, ... Microbiome 6, 1-11, 2018 | 262 | 2018 |
| Guidelines for genome-scale analysis of biological rhythms ME Hughes, KC Abruzzi, R Allada, R Anafi, AB Arpat, G Asher, P Baldi, ... Journal of biological rhythms 32 (5), 380-393, 2017 | 227 | 2017 |
| The stepwise assembly of the neonatal virome is modulated by breastfeeding G Liang, C Zhao, H Zhang, L Mattei, S Sherrill-Mix, K Bittinger, LR Kessler, ... Nature 581 (7809), 470-474, 2020 | 216 | 2020 |
| Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing KE Ocwieja, S Sherrill-Mix, R Mukherjee, R Custers-Allen, P David, ... Nucleic acids research 40 (20), 10345-10355, 2012 | 179 | 2012 |
| Engineering HIV-resistant human CD4+ T cells with CXCR4-specific zinc-finger nucleases CB Wilen, J Wang, JC Tilton, JC Miller, KA Kim, EJ Rebar, SA Sherrill-Mix, ... PLoS pathogens 7 (4), e1002020, 2011 | 179 | 2011 |
| Hepatitis C virus transmission bottlenecks analyzed by deep sequencing GP Wang, SA Sherrill-Mix, KM Chang, C Quince, FD Bushman Journal of virology 84 (12), 6218-6228, 2010 | 163 | 2010 |
| Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness SS Iyer, F Bibollet-Ruche, S Sherrill-Mix, GH Learn, L Plenderleith, ... Proceedings of the National Academy of Sciences 114 (4), E590-E599, 2017 | 158 | 2017 |
| A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples S Dollive, GL Peterfreund, S Sherrill-Mix, K Bittinger, R Sinha, C Hoffmann, ... Genome biology 13, 1-13, 2012 | 157 | 2012 |
| Population characteristics and seasonal migrations of leatherback sea turtles at high latitudes MC James, SA Sherrill-Mix, RA Myers Marine Ecology Progress Series 337, 245-254, 2007 | 125 | 2007 |
| Ggbeeswarm: Categorical scatter (violin point) plots E Clarke, S Sherrill-Mix, C Dawson R package version 0.6. 0, 2017 | 123 | 2017 |
| HIV latency and integration site placement in five cell-based models S Sherrill-Mix, MK Lewinski, M Famiglietti, A Bosque, N Malani, ... Retrovirology 10, 1-14, 2013 | 118 | 2013 |
| DNA binding to TLR9 expressed by red blood cells promotes innate immune activation and anemia LKM Lam, S Murphy, D Kokkinaki, A Venosa, S Sherrill-Mix, C Casu, ... Science translational medicine 13 (616), eabj1008, 2021 | 115 | 2021 |
| HIV-1 latent reservoir size and diversity are stable following brief treatment interruption DB Salantes, Y Zheng, F Mampe, T Srivastava, S Beg, J Lai, JZ Li, ... The Journal of clinical investigation 128 (7), 3102-3115, 2018 | 110 | 2018 |
| Canadian waters provide critical foraging habitat for leatherback sea turtles MC James, SA Sherrill-Mix, K Martin, RA Myers Biological Conservation 133 (3), 347-357, 2006 | 107 | 2006 |
| CD19-targeting CAR T cell immunotherapy outcomes correlate with genomic modification by vector integration CL Nobles, S Sherrill-Mix, JK Everett, S Reddy, JA Fraietta, DL Porter, ... The Journal of Clinical Investigation 130 (2), 673-685, 2020 | 96 | 2020 |
