StreptomeDB 3.0: an updated compendium of streptomycetes natural products AFA Moumbock, M Gao, A Qaseem, J Li, PA Kirchner, B Ndingkokhar, ... Nucleic acids research 49 (D1), D600-D604, 2021 | 72 | 2021 |
Electron paramagnetic resonance study of ZnO varistor material R Baraki, P Zierep, E Erdem, S Weber, T Granzow Journal of Physics: Condensed Matter 26 (11), 115801, 2014 | 42 | 2014 |
SeMPI: a genome-based secondary metabolite prediction and identification web server PF Zierep, N Padilla, DG Yonchev, KK Telukunta, D Klementz, S Günther Nucleic Acids Research 45 (W1), W64-W71, 2017 | 26 | 2017 |
SeMPI 2.0—a web server for PKS and NRPS predictions combined with metabolite screening in natural product databases PF Zierep, AT Ceci, I Dobrusin, SC Rockwell-Kollmann, S Günther Metabolites 11 (1), 13, 2020 | 21 | 2020 |
Computational applications in secondary metabolite discovery (CAiSMD): an online workshop F Ntie-Kang, KK Telukunta, SAT Fobofou, V Chukwudi Osamor, ... Journal of Cheminformatics 13 (1), 64, 2021 | 6 | 2021 |
Towards the prediction of non-peptidic epitopes PF Zierep, R Vita, N Blazeska, AFA Moumbock, JA Greenbaum, B Peters, ... PLoS Computational Biology 18 (2), e1009151, 2022 | 3 | 2022 |
Metatranscriptomics analysis using microbiome RNA-seq data P Jagtap, S Mehta, R Sajulga, B Batut, E Leith, P Kumar, S Hiltemann, ... Galaxy Training Network, 2024 | 1 | 2024 |
PathoGFAIR: collection of Galaxy FAIR workflows for pathogen detection and samples comparison E Nasr, A Henger, B Gruening, P Zierep, B Batut GCC 2024-Galaxy Community Conference, 2024 | | 2024 |
Galaxy CoDex for finding tools, workflows, and training B Batut, W Bacon, P Zierep, M Bernt, N Soranzo, OJR Gustafsson GCC 2024-Galaxy Community Conference, 2024 | | 2024 |
Pathogen detection from (direct Nanopore) sequencing data using Galaxy-Foodborne Edition B Batut, E Nasr, P Zierep Galaxy Training Network, 2024 | | 2024 |
How sensor Amt-like proteins integrate ammonium signals T Pflüger, M Gschell, L Zhang, V Shnitsar, AJ Zabadné, P Zierep, ... Science Advances 10 (23), eadm9441, 2024 | | 2024 |
Taxonomic Profiling and Visualization of Metagenomic Data S Hampe, B Batut, P Zierep Galaxy Training Network, 2024 | | 2024 |
How to improve the annotation of Galaxy resources? Outcomes of an online hackathon for improving the annotation of Galaxy resources for microbial data resources B Batut, M Bernt, MH Ansari, M Kalaš, P Klemm, R Libouban, E Nasr, ... OSF, 2024 | | 2024 |
How to increase the findability, visibility, and impact of Galaxy tools for your scientific community P Zierep, B Batut, M Kalaš, T Kayikcioglu, E Nasr, N Soranzo, WC Thang, ... OSF, 2024 | | 2024 |
Secondary metabolite discovery P Zierep Galaxy Training Network, 2024 | | 2024 |
PathoGFAIR: a collection of FAIR and adaptable (meta) genomics workflows for (foodborne) pathogens detection and tracking E Nasr, A Henger, B Gruning, P Zierep, B Batut bioRxiv, 2024.06. 26.600753, 2024 | | 2024 |
Samples Preparation for Foodborne Pathogen Detection and Tracking project E Nasr, B Grüning, P Zierep, B Batut | | 2023 |
Conda, Container and Bots: How to Build and Maintain Tool Dependencies in Workflows and Training Materials P Zierep, SK Srikakulam, S Schaaf, B Grüning Proceedings of the Conference on Research Data Infrastructure 1, 2023 | | 2023 |
Development of bioinformatic methods for the prediction and understanding of biosynthesis and activity of natural products P Zierep Dissertation, Universität Freiburg, 2020, 2020 | | 2020 |
61 Relaxationszeiten von H2 und Lebensdauer von angereichertem Parawasserstoff in protonierten Lösungsmitteln A Schmidt, J Wörner, P Zierep, N Pompe, H Scherer, S Weber, J Hennig, ... Würzburg, 69, 2014 | | 2014 |