| Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra T Evangelidis, S Nerli, J Nováček, AE Brereton, PA Karplus, RR Dotas, ... Nature communications 9 (1), 1-13, 2018 | 44 | 2018 |
| Experimentally dissecting the origins of peroxiredoxin catalysis KJ Nelson, A Perkins, AED Van Swearingen, S Hartman, AE Brereton, ... Antioxidants & redox signaling 28 (7), 521-536, 2018 | 33 | 2018 |
| Native proteins trap high-energy transit conformations AE Brereton, PA Karplus Science advances 1 (9), e1501188, 2015 | 20 | 2015 |
| Ensemblator v3: Robust atom‐level comparative analyses and classification of protein structure ensembles AE Brereton, PA Karplus Protein Science 27 (1), 41-50, 2018 | 15 | 2018 |
| Assessing methods and obstacles in chemical space exploration S Reeves, B DiFrancesco, V Shahani, S MacKinnon, A Windemuth, ... Applied AI Letters 1 (2), e17, 2020 | 13 | 2020 |
| Predicting drug properties with parameter-free machine learning: Pareto-Optimal Embedded Modelling (POEM) AE Brereton, S MacKinnon, Z Safikhani, S Reeves, S Alwash, V Shahani, ... Machine Learning: Science and Technology 1 (2), 2020 | 11 | 2020 |
| NMR structure of the HIV-1 reverse transcriptase thumb subdomain NG Sharaf, AE Brereton, IJL Byeon, P Andrew Karplus, AM Gronenborn Journal of biomolecular NMR 66 (4), 273-280, 2016 | 8 | 2016 |
| On the reliability of peptide nonplanarity seen in ultra‐high resolution crystal structures AE Brereton, PA Karplus Protein Science 25 (4), 926-932, 2016 | 8 | 2016 |
| Learning across label confidence distributions using Filtered Transfer Learning SAM Tonekaboni, AE Brereton, Z Safikhani, A Windemuth, B Haibe-Kains, ... 2020 19th IEEE International Conference on Machine Learning and Applications …, 2020 | 3 | 2020 |
| Method and system for predicting drug binding using synthetic data SS Mackinnon, Z Safikhani, R Vernon, AE Brereton, A Windemuth US Patent App. 17/420,582, 2022 | | 2022 |
| Method and system for differential drug discovery SS Mackinnon, V Shahani, A Windemuth, L Morayniss, A Brereton, N Kurji US Patent App. 16/765,829, 2020 | | 2020 |
| Method and System for Predicting Properties of Chemical Structures AE Brereton, S Alwash, JC Somody, SS Mackinnon, A Windemuth WO Patent App. 17719/080WO1, 2018 | | 2018 |
| Exploring Protein Structure: Seeing the Forest and the Trees. AE Brereton | | 2017 |
P. Andrew KarplusBiochemistry & Biophysics, Oregon State UniversityVerified email at science.oregonstate.edu
