| The genome of the sea urchin Strongylocentrotus purpuratus E Sodergren, GM Weinstock, EH Davidson, RA Cameron, RA Gibbs, ... Science 314 (5801), 941-952, 2006 | 1006 | 2006 |
| Promoter regions of many neural-and nutrition-related genes have experienced positive selection during human evolution R Haygood, O Fedrigo, B Hanson, KD Yokoyama, GA Wray Nature genetics 39 (9), 1140, 2007 | 307 | 2007 |
| Reading frame correction by targeted genome editing restores dystrophin expression in cells from Duchenne muscular dystrophy patients DG Ousterout, P Perez-Pinera, PI Thakore, AM Kabadi, MT Brown, X Qin, ... Molecular Therapy 21 (9), 1718-1726, 2013 | 177 | 2013 |
| Phylogenetic relationships among the major lineages of modern elasmobranchs GJP Naylor, JA Ryburn, O Fedrigo, JA Lopez Reproductive biology and phylogeny 3 (1), 25, 2005 | 126 | 2005 |
| Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection Y Shibata, NC Sheffield, O Fedrigo, CC Babbitt, M Wortham, AK Tewari, ... PLoS genetics 8 (6), e1002789, 2012 | 105 | 2012 |
| Both noncoding and protein-coding RNAs contribute to gene expression evolution in the primate brain CC Babbitt, O Fedrigo, AD Pfefferle, AP Boyle, JE Horvath, TS Furey, ... Genome biology and evolution 2, 67-79, 2010 | 97 | 2010 |
| Contrasts between adaptive coding and noncoding changes during human evolution R Haygood, CC Babbitt, O Fedrigo, GA Wray Proceedings of the National Academy of Sciences 107 (17), 7853-7857, 2010 | 93 | 2010 |
| Choosing the best genes for the job: the case for stationary genes in genome-scale phylogenetics TM Collins, O Fedrigo, GJP Naylor Systematic Biology 54 (3), 493-500, 2005 | 78 | 2005 |
| Phylogeny of sharks of the family Triakidae (Carcharhiniformes) and its implications for the evolution of carcharhiniform placental viviparity JA López, JA Ryburn, O Fedrigo, GJP Naylor Molecular Phylogenetics and Evolution 40 (1), 50-60, 2006 | 75 | 2006 |
| High-coverage sequencing and annotated assemblies of the budgerigar genome G Ganapathy, JT Howard, JM Ward, J Li, B Li, Y Li, Y Xiong, Y Zhang, ... GigaScience 3 (1), 11, 2014 | 68 | 2014 |
| Genomic signatures of diet-related shifts during human origins CC Babbitt, LR Warner, O Fedrigo, CE Wall, GA Wray Proceedings of the Royal Society B: Biological Sciences 278 (1708), 961-969, 2010 | 53 | 2010 |
| Comparative expression analysis of the phosphocreatine circuit in extant primates: Implications for human brain evolution AD Pfefferle, LR Warner, CW Wang, WJ Nielsen, CC Babbitt, O Fedrigo, ... Journal of human evolution 60 (2), 205-212, 2011 | 38 | 2011 |
| Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ... Nature biotechnology 36 (12), 1197, 2018 | 37 | 2018 |
| A potential role for glucose transporters in the evolution of human brain size O Fedrigo, AD Pfefferle, CC Babbitt, R Haygood, CE Wall, GA Wray Brain, behavior and evolution 78 (4), 315-326, 2011 | 33 | 2011 |
| PAQ: partition analysis of quasispecies P Baccam, RJ Thompson, O Fedrigo, S Carpenter, JL Cornette Bioinformatics 17 (1), 16-22, 2001 | 33 | 2001 |
| Genome Reference and Sequence Variation in the Large Repetitive Central Exon of Human MUC5AC X Guo, S Zheng, H Dang, RG Pace, JR Stonebraker, CD Jones, ... American journal of respiratory cell and molecular biology 50 (1), 223-232, 2014 | 31 | 2014 |
| A pipeline to determine RT-QPCR control genes for evolutionary studies: application to primate gene expression across multiple tissues O Fedrigo, LR Warner, AD Pfefferle, CC Babbitt, P Cruz-Gordillo, GA Wray PLoS One 5 (9), e12545, 2010 | 26 | 2010 |
| Genetic comparisons yield insight into the evolution of enamel thickness during human evolution JE Horvath, GL Ramachandran, O Fedrigo, WJ Nielsen, CC Babbitt, ... Journal of human evolution 73, 75-87, 2014 | 25 | 2014 |
| Rapidly evolving human promoter regions MS Taylor, T Massingham, Y Hayashizaki, P Carninci, N Goldman, ... Nature genetics 40 (11), 1262, 2008 | 23 | 2008 |
| Phylogeny reconstruction and functional constraints in organellar genomes: plastid atpB and rbcL sequences versus animal mitochondrion V Savolainen, MW Chase, N Salamin, DE Soltis, PS Soltis, AJ Lopez, ... Systematic biology 51 (4), 638-647, 2002 | 21 | 2002 |
