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JT McCrone
JT McCrone
Assistant Professor, Fred Hutch Cancer Center
Verified email at fredhutch.org - Homepage
Title
Cited by
Cited by
Year
A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology
A Rambaut, EC Holmes, Á O’Toole, V Hill, JT McCrone, C Ruis, ...
Nature microbiology 5 (11), 1403-1407, 2020
26432020
Assessing transmissibility of SARS-CoV-2 lineage B. 1.1. 7 in England
E Volz, S Mishra, M Chand, JC Barrett, R Johnson, L Geidelberg, ...
Nature 593 (7858), 266-269, 2021
1694*2021
Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil
NR Faria, TA Mellan, C Whittaker, IM Claro, DS Candido, S Mishra, ...
Science 372 (6544), 815-821, 2021
15022021
Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity
E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ...
Cell 184 (1), 64-75. e11, 2021
10592021
Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool
Á O’Toole, E Scher, A Underwood, B Jackson, V Hill, JT McCrone, ...
Virus evolution 7 (2), veab064, 2021
8572021
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
L Du Plessis, JT McCrone, AE Zarebski, V Hill, C Ruis, B Gutierrez, ...
Science 371 (6530), 708-712, 2021
414*2021
Genomic epidemiology of SARS-CoV-2 in Guangdong province, China
J Lu, L du Plessis, Z Liu, V Hill, M Kang, H Lin, J Sun, S François, ...
Cell 181 (5), 997-1003. e9, 2020
2732020
Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic
B Jackson, MF Boni, MJ Bull, A Colleran, RM Colquhoun, AC Darby, ...
Cell 184 (20), 5179-5188. e8, 2021
2032021
Stochastic processes constrain the within and between host evolution of influenza virus
JT McCrone, RJ Woods, ET Martin, RE Malosh, AS Monto, AS Lauring
Elife 7, e35962, 2018
1912018
Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2
P Lemey, SL Hong, V Hill, G Baele, C Poletto, V Colizza, Á O’toole, ...
Nature communications 11 (1), 5110, 2020
154*2020
Genomics and epidemiology of a novel SARS-CoV-2 lineage in Manaus
NR Faria, TA Mellan, C Whittaker, IM Claro, DS Candido, S Mishra, ...
Brazil. medRxiv 2021 (26.21252554), 2021
153*2021
Resurgence of Ebola virus in 2021 in Guinea suggests a new paradigm for outbreaks
AK Keita, FR Koundouno, M Faye, A Düx, J Hinzmann, H Diallo, ...
Nature 597 (7877), 539-543, 2021
1482021
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B. 1.1. 7 emergence
MUG Kraemer, V Hill, C Ruis, S Dellicour, S Bajaj, JT McCrone, G Baele, ...
Science 373 (6557), 889-895, 2021
1442021
Genetic bottlenecks in intraspecies virus transmission
JT McCrone, AS Lauring
Current opinion in virology 28, 20-25, 2018
1122018
Measurements of intrahost viral diversity are extremely sensitive to systematic errors in variant calling
JT McCrone, AS Lauring
Journal of virology 90 (15), 6884-6895, 2016
1092016
A speed–fidelity trade-off determines the mutation rate and virulence of an RNA virus
WJ Fitzsimmons, RJ Woods, JT McCrone, A Woodman, JJ Arnold, ...
PLoS biology 16 (6), e2006459, 2018
1072018
Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland
A da Silva Filipe, JG Shepherd, T Williams, J Hughes, E Aranday-Cortes, ...
Nature Microbiology 6 (1), 112-122, 2021
1022021
The mutational robustness of influenza A virus
E Visher, SE Whitefield, JT McCrone, W Fitzsimmons, AS Lauring
PLoS pathogens 12 (8), e1005856, 2016
1012016
Vaccination has minimal impact on the intrahost diversity of H3N2 influenza viruses
K Debbink, JT McCrone, JG Petrie, R Truscon, E Johnson, EK Mantlo, ...
PLoS pathogens 13 (1), e1006194, 2017
952017
The origins and molecular evolution of SARS-CoV-2 lineage B. 1.1. 7 in the UK
V Hill, L Du Plessis, TP Peacock, D Aggarwal, R Colquhoun, AM Carabelli, ...
Virus Evolution 8 (2), veac080, 2022
892022
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