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Peng He
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Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
11532020
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ...
Nature medicine 27 (3), 546-559, 2021
547*2021
Single-cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogramming
DH Kim, GK Marinov, S Pepke, ZS Singer, P He, B Williams, GP Schroth, ...
Cell stem cell 16 (1), 88-101, 2015
1762015
Mapping the developing human immune system across organs
C Suo, E Dann, I Goh, L Jardine, V Kleshchevnikov, JE Park, RA Botting, ...
Science 376 (6597), eabo0510, 2022
1522022
The changing mouse embryo transcriptome at whole tissue and single-cell resolution
P He, BA Williams, D Trout, GK Marinov, H Amrhein, L Berghella, ST Goh, ...
Nature 583 (7818), 760-767, 2020
1282020
Perspectives on ENCODE
MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ...
Nature 583 (7818), 693-698, 2020
106*2020
A human fetal lung cell atlas uncovers proximal-distal gradients of differentiation and key regulators of epithelial fates
P He, K Lim, D Sun, JP Pett, Q Jeng, K Polanski, Z Dong, L Bolt, ...
Cell 185 (25), 4841-4860. e25, 2022
722022
A spatially resolved atlas of the human lung characterizes a gland-associated immune niche
E Madissoon, AJ Oliver, V Kleshchevnikov, A Wilbrey-Clark, K Polanski, ...
Nature Genetics 55 (1), 66-77, 2023
71*2023
Epigenetic silencing of miR-125b is required for normal B-cell development
G Li, AYL So, R Sookram, S Wong, JK Wang, Y Ouyang, P He, Y Su, ...
Blood, The Journal of the American Society of Hematology 131 (17), 1920-1930, 2018
422018
Odd-paired is a pioneer-like factor that coordinates with Zelda to control gene expression in embryos
T Koromila, F Gao, Y Iwasaki, P He, L Pachter, JP Gergen, A Stathopoulos
Elife 9, e59610, 2020
322020
Organoid modeling of human fetal lung alveolar development reveals mechanisms of cell fate patterning and neonatal respiratory disease
K Lim, APA Donovan, W Tang, D Sun, P He, JP Pett, SA Teichmann, ...
Cell Stem Cell 30 (1), 20-37. e9, 2023
29*2023
SOX9 maintains human foetal lung tip progenitor state by enhancing WNT and RTK signalling
D Sun, O Llora Batlle, J van den Ameele, JC Thomas, P He, K Lim, ...
The EMBO Journal 41 (21), e111338, 2022
20*2022
Maternally inherited siRNAs initiate piRNA cluster formation
Y Luo, P He, N Kanrar, KF Toth, AA Aravin
Molecular Cell 83 (21), 3835-3851. e7, 2023
152023
Automatic cell-type harmonization and integration across Human Cell Atlas datasets
C Xu, M Prete, S Webb, L Jardine, BJ Stewart, R Hoo, P He, KB Meyer, ...
Cell 186 (26), 5876-5891. e20, 2023
132023
A human embryonic limb cell atlas resolved in space and time
B Zhang, P He, JEG Lawrence, S Wang, E Tuck, BA Williams, K Roberts, ...
Nature, 1-11, 2023
92023
Early human lung immune cell development and its role in epithelial cell fate
JL Barnes, M Yoshida, P He, KB Worlock, RGH Lindeboom, C Suo, ...
Science Immunology 8 (90), eadf9988, 2023
62023
A single-cell atlas enables mapping of homeostatic cellular shifts in the adult human breast
AD Reed, S Pensa, A Steif, J Stenning, DJ Kunz, LJ Porter, K Hua, P He, ...
Nature Genetics, 1-11, 2024
4*2024
WebAtlas pipeline for integrated single cell and spatial transcriptomic data
T Li, D Horsfall, D Basurto-Lozada, K Roberts, M Prete, JEG Lawrence, ...
bioRxiv, 2023.05. 19.541329, 2023
42023
Single cell transcriptomics reveals chondrocyte differentiation dynamics in vivo and in vitro
JEG Lawrence, S Woods, K Roberts, DN Sumanaweera, P Balogh, ...
bioRxiv, 2023.12. 20.572425, 2023
2023
A human prenatal skin cell atlas reveals immune cell regulation of skin morphogenesis
NH Gopee, N Huang, B Olabi, C Admane, RA Botting, AR Foster, F Torabi, ...
bioRxiv, 2023.10. 12.556307, 2023
2023
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