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Mauricio J. del Razo
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MSM/RD: Coupling Markov state models of molecular kinetics with reaction-diffusion simulations
M Dibak, MJ del Razo, D De Sancho, C Schütte, F Noé
The Journal of chemical physics 148 (21), 214107, 2018
322018
Riemann problems and Jupyter solutions
DI Ketcheson, RJ LeVeque, MJ Del Razo
SIAM, 2020
242020
Multiscale molecular kinetics by coupling Markov state models and reaction-diffusion dynamics
MJ Del Razo, M Dibak, C Schütte, F Noé
The Journal of Chemical Physics 155 (12), 2021
182021
A probabilistic framework for particle-based reaction–diffusion dynamics using classical Fock space representations
MJ Del Razo, D Frömberg, AV Straube, C Schütte, F Höfling, ...
Letters in Mathematical Physics 112 (3), 49, 2022
162022
Grand canonical diffusion-influenced reactions: A stochastic theory with applications to multiscale reaction-diffusion simulations
MJ Del Razo, H Qian, F Noé
The Journal of chemical physics 149 (4), 2018
162018
A discrete stochastic formulation for reversible bimolecular reactions via diffusion encounter
MJ Del Razo, H Qian
Communications in Mathematical Sciences 14 (6), 1741-1772, 2015
162015
Independent Markov decomposition: Toward modeling kinetics of biomolecular complexes
T Hempel, MJ Del Razo, CT Lee, BC Taylor, RE Amaro, F Noé
Proceedings of the National Academy of Sciences 118 (31), e2105230118, 2021
152021
Coupling particle-based reaction-diffusion simulations with reservoirs mediated by reaction-diffusion PDEs
M Kostré, C Schütte, F Noé, MJ Del Razo
Multiscale Modeling & Simulation 19 (4), 1659-1683, 2021
152021
Computational and in vitro studies of blast-induced blood-brain barrier disruption
MJ Del Razo, Y Morofuji, JS Meabon, BR Huber, ER Peskind, WA Banks, ...
SIAM Journal on Scientific Computing 38 (3), B347-B374, 2016
142016
Chemical diffusion master equation: Formulations of reaction–diffusion processes on the molecular level
MJ del Razo, S Winkelmann, R Klein, F Höfling
Journal of Mathematical Physics 64 (1), 2023
102023
Computational study of shock waves propagating through air-plastic-water interfaces
MJ Del Razo, RJ LeVeque
Bulletin of the Brazilian Mathematical Society, New Series 47, 685-700, 2016
102016
Fluorescence correlation spectroscopy and nonlinear stochastic reaction–diffusion
MJ Del Razo, W Pan, H Qian, G Lin
The Journal of Physical Chemistry B 118 (25), 7037-7046, 2014
82014
Numerical methods for interface coupling of compressible and almost incompressible media
MJ Del Razo, RJ LeVeque
SIAM Journal on Scientific Computing 39 (3), B486-B507, 2017
62017
Solution formula for the general birth-death chemical diffusion master equation
A Lanconelli, BT Perçin, MJ del Razo
arXiv preprint arXiv:2302.10700, 2023
22023
Dynamics of systems with varying number of particles: from Liouville equations to general master equations for open systems
MJ del Razo
arXiv preprint arXiv:2403.14517, 2024
12024
Data-driven dynamical coarse-graining for condensed matter systems
MJ Del Razo, D Crommelin, PG Bolhuis
The Journal of Chemical Physics 160 (2), 2024
12024
Risk aversion promotes cooperation
J Armas, W Merbis, J Meylahn, SR Rad, MJ del Razo
arXiv preprint arXiv:2306.05971, 2023
12023
Open reaction-diffusion systems: bridging probabilistic theory across scales
MJ del Razo
arXiv preprint arXiv:2404.07119, 2024
2024
Stochastic Modeling of Reversible Biochemical Reaction-Diffusion Systems and High-Resolution Shock-Capturing Methods for Fluid Interfaces
MJ Del Razo Sarmina
2016
A Community-Driven Collection of Approximate Riemann Solvers for Hyperbolic Problems
MJ Del Razo, D Ketcheson, RJ LeVeque
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Artículos 1–20