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Bryan Bryson
Bryan Bryson
Associate Professor, Biological Engineering
Verified email at mit.edu - Homepage
Title
Cited by
Cited by
Year
Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput
TM Gierahn, MH Wadsworth, TK Hughes, BD Bryson, A Butler, R Satija, ...
Nature methods 14 (4), 395-398, 2017
8572017
Efficient integration of heterogeneous single-cell transcriptomes using Scanorama
B Hie, B Bryson, B Berger
Nature biotechnology 37 (6), 685-691, 2019
6252019
The bromodomain protein Brd4 insulates chromatin from DNA damage signalling
SR Floyd, ME Pacold, Q Huang, SM Clarke, FC Lam, IG Cannell, ...
Nature 498 (7453), 246-250, 2013
3382013
Variability in tuberculosis granuloma T cell responses exists, but a balance of pro-and anti-inflammatory cytokines is associated with sterilization
HP Gideon, JY Phuah, AJ Myers, BD Bryson, MA Rodgers, MT Coleman, ...
PLoS pathogens 11 (1), e1004603, 2015
3202015
Learning the language of viral evolution and escape
B Hie, ED Zhong, B Berger, B Bryson
Science 371 (6526), 284-288, 2021
2302021
Predicting the mutational drivers of future SARS-CoV-2 variants of concern
MC Maher, I Bartha, S Weaver, J Di Iulio, E Ferri, L Soriaga, FA Lempp, ...
Science translational medicine 14 (633), eabk3445, 2022
1282022
Leveraging uncertainty in machine learning accelerates biological discovery and design
B Hie, BD Bryson, B Berger
Cell systems 11 (5), 461-477. e9, 2020
1212020
Geometric sketching compactly summarizes the single-cell transcriptomic landscape
B Hie, H Cho, B DeMeo, B Bryson, B Berger
Cell systems 8 (6), 483-493. e7, 2019
1052019
SirT1 is required in the male germ cell for differentiation and fecundity in mice
EL Bell, I Nagamori, EO Williams, AM Del Rosario, BD Bryson, N Watson, ...
Development 141 (18), 3495-3504, 2014
1052014
Multimodal profiling of lung granulomas in macaques reveals cellular correlates of tuberculosis control
HP Gideon, TK Hughes, CN Tzouanas, MH Wadsworth, AA Tu, ...
Immunity 55 (5), 827-846. e10, 2022
992022
Molecular characterization of EGFR and EGFRvIII signaling networks in human glioblastoma tumor xenografts
H Johnson, AM Del Rosario, BD Bryson, MA Schroeder, JN Sarkaria, ...
Molecular & Cellular Proteomics 11 (12), 1724-1740, 2012
962012
Computational methods for single-cell RNA sequencing
B Hie, J Peters, SK Nyquist, AK Shalek, B Berger, BD Bryson
Annual Review of Biomedical Data Science 3, 339-364, 2020
912020
Heterogeneous GM-CSF signaling in macrophages is associated with control of Mycobacterium tuberculosis
BD Bryson, TR Rosebrock, FG Tafesse, CY Itoh, A Nibasumba, ...
Nature communications 10 (1), 2329, 2019
802019
Posttranslational modification of a histone-like protein regulates phenotypic resistance to isoniazid in mycobacteria
A Sakatos, GH Babunovic, MR Chase, A Dills, J Leszyk, T Rosebrock, ...
Science advances 4 (5), eaao1478, 2018
652018
The cellular architecture of the antimicrobial response network in human leprosy granulomas
F Ma, TK Hughes, RMB Teles, PR Andrade, BJ de Andrade Silva, ...
Nature immunology 22 (7), 839-850, 2021
552021
Dual RNA-Seq of human leprosy lesions identifies bacterial determinants linked to host immune response
DJ Montoya, P Andrade, BJA Silva, RMB Teles, F Ma, B Bryson, ...
Cell reports 26 (13), 3574-3585. e3, 2019
472019
TREM2 macrophages induced by human lipids drive inflammation in acne lesions
TH Do, F Ma, PR Andrade, R Teles, BJ de Andrade Silva, C Hu, ...
Science immunology 7 (73), eabo2787, 2022
442022
Contrastive learning in protein language space predicts interactions between drugs and protein targets
R Singh, S Sledzieski, B Bryson, L Cowen, B Berger
Proceedings of the National Academy of Sciences 120 (24), e2220778120, 2023
342023
Computer aided manual validation of mass spectrometry-based proteomic data
TG Curran, BD Bryson, M Reigelhaupt, H Johnson, FM White
Methods 61 (3), 219-226, 2013
342013
Panoramic stitching of heterogeneous single-cell transcriptomic data
B Hie, B Bryson, B Berger
BioRxiv, 371179, 2018
312018
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