| Highly sensitive and ultrafast read mapping for RNA-seq analysis I Medina, J Tárraga, H Martínez, S Barrachina, MI Castillo, J Paschall, ... DNA Research 23 (2), 93-100, 2016 | 33 | 2016 |
| Acceleration of short and long DNA read mapping without loss of accuracy using suffix array J Tárraga, V Arnau, H Martínez, R Moreno, D Cazorla, J Salavert-Torres, ... Bioinformatics 30 (23), 3396-3398, 2014 | 26 | 2014 |
| Dynamic reconfiguration of noniterative scientific applications: A case study with HPG aligner S Iserte, H Martínez, S Barrachina, M Castillo, R Mayo, AJ Peña The International Journal of High Performance Computing Applications 33 (5 …, 2019 | 15 | 2019 |
| A dynamic pipeline for RNA sequencing on multicore processors H Martínez, J Tárraga, I Medina, S Barrachina, M Castillo, J Dopazo, ... Proceedings of the 20th European MPI Users' Group Meeting, 235-240, 2013 | 13 | 2013 |
| Reformulating the direct convolution for high-performance deep learning inference on ARM processors S Barrachina, A Castelló, MF Dolz, TM Low, H Martínez, ES Quintana-Ortí, ... Journal of Systems Architecture 135, 102806, 2023 | 12 | 2023 |
| Concurrent and accurate RNA sequencing on multicore platforms H Martínez, J Tárraga, I Medina, S Barrachina, M Castillo, J Dopazo, ... arXiv preprint arXiv:1304.0681, 2013 | 9 | 2013 |
| A framework for genomic sequencing on clusters of multicore and manycore processors H Martínez, S Barrachina, M Castillo, J Tárraga, I Medina, J Dopazo, ... The International Journal of High Performance Computing Applications 32 (3 …, 2018 | 8 | 2018 |
| Scalable RNA sequencing on clusters of multicore processors H Martínez, S Barrachina, M Castillo, J Tárraga, I Medina, J Dopazo, ... 2015 IEEE Trustcom/BigDataSE/ISPA 3, 190-195, 2015 | 8 | 2015 |
| FaST-LMM for two-way epistasis tests on high-performance clusters H Martínez, S Barrachina, M Castillo, ES Quintana-Orti, ... Journal of Computational Biology 25 (8), 862-870, 2018 | 7 | 2018 |
| Micro-kernels for portable and efficient matrix multiplication in deep learning G Alaejos, A Castelló, H Martínez, P Alonso-Jordá, FD Igual, ... The Journal of Supercomputing 79 (7), 8124-8147, 2023 | 6 | 2023 |
| Efficient and portable Winograd convolutions for multi-core processors MF Dolz, H Martínez, A Castelló, P Alonso-Jordá, ES Quintana-Ortí The Journal of Supercomputing 79 (10), 10589-10610, 2023 | 5 | 2023 |
| Accelerating FaST-LMM for epistasis tests H Martínez, S Barrachina, M Castillo, ES Quintana-Ortí, JR De Argila, ... Algorithms and Architectures for Parallel Processing: 17th International …, 2017 | 4 | 2017 |
| Concurrent and accurate short read mapping on multicore processors H Martínez, J Tárraga, I Medina, S Barrachina, M Castillo, J Dopazo, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (5 …, 2015 | 4 | 2015 |
| Performance–energy trade-offs of deep learning convolution algorithms on ARM processors MF Dolz, S Barrachina, H Martínez, A Castelló, A Maciá, G Fabregat, ... The Journal of Supercomputing 79 (9), 9819-9836, 2023 | 3 | 2023 |
| Co-Design of the Dense Linear AlgebravSoftware Stack for Multicore Processors H Martínez, S Catalán, FD Igual, JR Herrero, R Rodríguez-Sánchez, ... arXiv preprint arXiv:2304.14480, 2023 | 3 | 2023 |
| 3D reconstruction system and multiobject local tracking algorithm designed for billiards FJ Rodriguez-Lozano, JC Gámez-Granados, H Martínez, JM Palomares, ... Applied Intelligence 53 (19), 21543-21575, 2023 | 2 | 2023 |
| Convolution operators for deep learning inference on the fujitsu a64fx processor MF Dolz, H Martínez, P Alonso, ES Quintana-Ortí 2022 IEEE 34th International Symposium on Computer Architecture and High …, 2022 | 2 | 2022 |
| Automatic generation of ARM NEON micro-kernels for matrix multiplication G Alaejos, H Martínez, A Castelló, MF Dolz, FD Igual, P Alonso-Jordá, ... The Journal of Supercomputing, 1-27, 2024 | 1 | 2024 |
| Automatic Generation of Micro-kernels for Performance Portability of Matrix Multiplication on RISC-V Vector Processors F Igual, L Piñuel, S Catalán, H Martínez, A Castelló, E Quintana-Ortí Proceedings of the SC'23 Workshops of The International Conference on High …, 2023 | 1 | 2023 |
| Performance analysis of matrix multiplication for deep learning on the edge C Ramírez, A Castelló, H Martínez, ES Quintana-Ortí International Conference on High Performance Computing, 65-76, 2022 | 1 | 2022 |
