| Gene expression and in situ protein profiling of candidate SARS-CoV-2 receptors in human airway epithelial cells and lung tissue JA Aguiar, BJM Tremblay, MJ Mansfield, O Woody, B Lobb, A Banerjee, ... European Respiratory Journal 56 (3), 2020 | 183 | 2020 |
| Enhancing diversity analysis by repeatedly rarefying next generation sequencing data describing microbial communities ES Cameron, PJ Schmidt, BJM Tremblay, MB Emelko, KM Müller Scientific reports 11 (1), 22302, 2021 | 93 | 2021 |
| An assessment of genome annotation coverage across the bacterial tree of life B Lobb, BJM Tremblay, G Moreno-Hagelsieb, AC Doxey Microbial Genomics 6 (3), e000341, 2020 | 87 | 2020 |
| Experimental and natural evidence of SARS-CoV-2-infection-induced activation of type I interferon responses A Banerjee, N El-Sayes, P Budylowski, RA Jacob, D Richard, H Maan, ... IScience 24 (5), 2021 | 46 | 2021 |
| universalmotif: Import, modify, and export motifs with R BJM Tremblay Bioconductor 1 (10.18129/B9.bioc.universalmotif), 2018 | 43* | 2018 |
| Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B MJ Mansfield*, BJM Tremblay*, J Zeng, X Wei, H Hodgins, J Worley, L Bry, ... PLoS pathogens 16 (12), e1009181, 2020 | 40 | 2020 |
| To rarefy or not to rarefy: Enhancing diversity analysis of microbial communities through next-generation sequencing and rarefying repeatedly ES Cameron, PJ Schmidt, BJM Tremblay, MB Emelko, KM Müller BioRxiv, 2020.09. 09.290049, 2020 | 31 | 2020 |
| Expression of endocannabinoid system components in human airway epithelial cells: Impact of sex and chronic respiratory disease status MF Fantauzzi, JA Aguiar, BJM Tremblay, MJ Mansfield, T Yanagihara, ... ERJ open research 6 (4), 2020 | 18 | 2020 |
| Predicting the recombination potential of severe acute respiratory syndrome coronavirus 2 and Middle East respiratory syndrome coronavirus A Banerjee*, AC Doxey*, BJM Tremblay*, MJ Mansfield*, S Subudhi, ... The Journal of General Virology 101 (12), 1251, 2020 | 17 | 2020 |
| ABCF1 regulates dsDNA-induced immune responses in human airway epithelial cells QT Cao, JA Aguiar, BJM Tremblay, N Abbas, N Tiessen, S Revill, ... Frontiers in Cellular and Infection Microbiology 10, 487, 2020 | 14 | 2020 |
| PhyloCorrelate: inferring bacterial gene–gene functional associations through large-scale phylogenetic profiling BJM Tremblay, B Lobb, AC Doxey Bioinformatics 37 (1), 17-22, 2021 | 13 | 2021 |
| Endogenous CRISPR-Cas systems in group I Clostridium botulinum and Clostridium sporogenes do not directly target the botulinum neurotoxin gene cluster TG Wentz, BJM Tremblay, M Bradshaw, AC Doxey, SK Sharma, JD Sauer, ... Frontiers in microbiology 12, 787726, 2022 | 12 | 2022 |
| Identification of TFPI as a receptor reveals recombination-driven receptor switching in Clostridioides difficile toxin B variants S Tian, X Xiong, J Zeng, S Wang, BJM Tremblay, P Chen, B Chen, M Liu, ... Nature communications 13 (1), 6786, 2022 | 9 | 2022 |
| Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains HP Hodgins, P Chen, B Lobb, X Wei, BJM Tremblay, MJ Mansfield, ... Nature Communications 14 (1), 5475, 2023 | 4 | 2023 |
| PathFams: statistical detection of pathogen-associated protein domains B Lobb, BJM Tremblay, G Moreno-Hagelsieb, AC Doxey BMC genomics 22, 1-11, 2021 | 2 | 2021 |
| Mechanisms of epigenetic regulation of transcription by lncRNAs in plants BJM Tremblay, JI Qüesta IUBMB life 75 (5), 427-439, 2023 | 1 | 2023 |
| Expression of endocannabinoid system components in human airway epithelial cells: impact of sex and chronic respiratory disease status (vol 6, 00128-2020, 2020) MF Fantauzzi, JA Aguiar, BJM Tremblay, MJ Mansfield, T Yanagihara, ... ERJ OPEN RESEARCH 7 (2), 2021 | 1 | 2021 |
| Early temporal dynamics of cellular responses to SARS-CoV-2 A Banerjee, P Budylowski, D Richard, H Maan, JA Aguiar, N El-Sayes, ... bioRxiv, 2020.06. 18.158154, 2020 | 1 | 2020 |
| Interplay between coding and non-coding regulation drives the Arabidopsis seed-to-seedling transition BJM Tremblay, CP Santini, Y Cheng, X Zhang, S Rosa, JI Qüesta Nature Communications 15 (1), 1724, 2024 | | 2024 |
| Characterization of CXCL10 as a biomarker of respiratory tract infections detectable by open-source lateral flow immunoassay D Mikkelsen, JA Aguiar, BJM Tremblay, MS Hunjan, U Eckhard, J Gilchrist, ... medRxiv, 2024.01. 12.24301261, 2024 | | 2024 |
Andrew DoxeyAssociate Professor, University of WaterlooVerified email at uwaterloo.ca
