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Donghui Choe Ph.D.
Donghui Choe Ph.D.
Dept. Bioengineering, UCSD
Verified email at ucsd.edu
Title
Cited by
Cited by
Year
High-Level dCas9 Expression Induces Abnormal Cell Morphology in Escherichia coli
S Cho, D Choe, E Lee, SC Kim, B Palsson, BK Cho
ACS synthetic biology 7 (4), 1085-1094, 2018
1632018
Adaptive laboratory evolution of a genome-reduced Escherichia coli
D Choe, JH Lee, M Yoo, S Hwang, BH Sung, S Cho, B Palsson, SC Kim, ...
Nature communications 10 (1), 935, 2019
1322019
Minimal genome: Worthwhile or worthless efforts toward being smaller?
D Choe, S Cho, SC Kim, BK Cho
Biotechnology journal 11 (2), 199-211, 2016
632016
Ageing and rejuvenation models reveal changes in key microbial communities associated with healthy ageing
J Shin, JR Noh, D Choe, N Lee, Y Song, S Cho, EJ Kang, MJ Go, SK Ha, ...
Microbiome 9, 1-19, 2021
532021
Engineering biology to construct microbial chassis for the production of difficult-to-express proteins
K Kim, D Choe, DH Lee, BK Cho
International Journal of Molecular Sciences 21 (3), 990, 2020
362020
Genome-scale analysis of Methicillin-resistant Staphylococcus aureus USA300 reveals a tradeoff between pathogenesis and drug resistance
D Choe, R Szubin, S Dahesh, S Cho, V Nizet, B Palsson, BK Cho
Scientific reports 8 (1), 2215, 2018
322018
Construction of a minimal genome as a chassis for synthetic biology
BH Sung, D Choe, SC Kim, BK Cho
Essays in biochemistry 60 (4), 337-346, 2016
322016
A multifaceted cellular damage repair and prevention pathway promotes high‐level tolerance to β‐lactam antibiotics
JH Shin, D Choe, B Ransegnola, HR Hong, I Onyekwere, T Cross, Q Shi, ...
EMBO reports 22 (2), e51790, 2021
282021
Peptide transporter CstA imports pyruvate in Escherichia coli K-12
S Hwang, D Choe, M Yoo, S Cho, SC Kim, S Cho, BK Cho
Journal of Bacteriology 200 (7), 10.1128/jb. 00771-17, 2018
272018
Synthetic biology approaches in the development of engineered therapeutic microbes
M Kang, D Choe, K Kim, BK Cho, S Cho
International Journal of Molecular Sciences 21 (22), 8744, 2020
232020
Inactivation of a mismatch-repair system diversifies genotypic landscape of Escherichia coli during adaptive laboratory evolution
M Kang, K Kim, D Choe, S Cho, SC Kim, B Palsson, BK Cho
Frontiers in microbiology 10, 471551, 2019
232019
Engineering Bacteroides thetaiotaomicron to produce non-native butyrate based on a genome-scale metabolic model-guided design
K Kim, D Choe, Y Song, M Kang, SG Lee, DH Lee, BK Cho
Metabolic Engineering 68, 174-186, 2021
162021
Exploring the functional residues in a flavin-binding fluorescent protein using deep mutational scanning
HS Shin, Y Cho, D Choe, Y Jeong, S Cho, SC Kim, BK Cho
PloS one 9 (6), e97817, 2014
152014
Adaptive laboratory evolution of Escherichia coli W enhances gamma-aminobutyric acid production using glycerol as the carbon source
K Kim, CY Hou, D Choe, M Kang, S Cho, BH Sung, DH Lee, SG Lee, ...
Metabolic Engineering 69, 59-72, 2022
132022
The Bitome: digitized genomic features reveal fundamental genome organization
CR Lamoureux, KS Choudhary, ZA King, TE Sandberg, Y Gao, AV Sastry, ...
Nucleic Acids Research 48 (18), 10157-10163, 2020
132020
RiboRid: A low cost, advanced, and ultra-efficient method to remove ribosomal RNA for bacterial transcriptomics
D Choe, R Szubin, S Poudel, A Sastry, Y Song, Y Lee, S Cho, B Palsson, ...
PLoS genetics 17 (9), e1009821, 2021
122021
Mini review: Enzyme-based DNA synthesis and selective retrieval for data storage
E Yoo, D Choe, J Shin, S Cho, BK Cho
Computational and Structural Biotechnology Journal 19, 2468-2476, 2021
122021
Genome analysis of a hyper acetone‐butanol‐ethanol (ABE) producing Clostridium acetobutylicum BKM19
C Cho, D Choe, YS Jang, KJ Kim, WJ Kim, BK Cho, ET Papoutsakis, ...
Biotechnology Journal 12 (2), 1600457, 2017
122017
STATR: A simple analysis pipeline of Ribo-Seq in bacteria
D Choe, B Palsson, BK Cho
journal of microbiology 58, 217-226, 2020
92020
Elucidating the regulatory elements for transcription termination and posttranscriptional processing in the Streptomyces clavuligerus genome
S Hwang, N Lee, D Choe, Y Lee, W Kim, Y Jeong, S Cho, BO Palsson, ...
Msystems 6 (3), 10.1128/msystems. 01013-20, 2021
52021
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Articles 1–20