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Andres S Espindola
Andres S Espindola
Assistant Professor, Institute for Biosecurity and Microbial Forensics at Oklahoma State University
Verified email at okstate.edu - Homepage
Title
Cited by
Cited by
Year
E-probe Diagnostic Nucleic acid Analysis (EDNA): a theoretical approach for handling of next generation sequencing data for diagnostics
AH Stobbe, J Daniels, AS Espindola, R Verma, U Melcher, ...
Journal of microbiological methods 94 (3), 356-366, 2013
582013
A new approach for detecting fungal and oomycete plant pathogens in next generation sequencing metagenome data utilising electronic probes
A Espindola, W Schneider, PR Hoyt, SM Marek, C Garzon
International journal of data mining and bioinformatics 12 (2), 115-128, 2015
402015
Population Structure of Pythium irregulare, P. ultimum, and P. sylvaticum in Forest Nursery Soils of Oregon and Washington
JE Weiland, P Garrido, ZN Kamvar, AS Espíndola, SM Marek, ...
Phytopathology 105 (5), 684-694, 2015
242015
Microbe Finder (MiFi®): Implementation of an Interactive Pathogen Detection Tool in Metagenomic Sequence Data
AS Espindola, KF Cardwell
Plants 10 (2), 250, 2021
182021
Whole-genome sequences of Ralstonia solanacearum strains P816, P822, and P824, emerging pathogens of blueberry in Florida
AM Bocsanczy, AS Espindola, DJ Norman
Microbiology Resource Announcements 8 (3), 10.1128/mra. 01316-18, 2019
182019
Inferring the presence of aflatoxin-producing Aspergillus flavus strains using RNA sequencing and electronic probes as a transcriptomic screening tool
AS Espindola, W Schneider, KF Cardwell, Y Carrillo, PR Hoyt, SM Marek, ...
PloS one 13 (10), e0198575, 2018
182018
TASPERT: Target-specific reverse transcript pools to improve HTS plant virus diagnostics
AS Espindola, D Sempertegui-Bayas, DF Bravo-Padilla, V Freire-Zapata, ...
Viruses 13 (7), 1223, 2021
122021
A step towards validation of high-throughput sequencing for the identification of plant pathogenic oomycetes
AS Espindola, K Cardwell, FN Martin, PR Hoyt, SM Marek, W Schneider, ...
Phytopathology® 112 (9), 1859-1866, 2022
112022
Highly Sensitive End-Point PCR and SYBR Green qPCR Detection of Phymatotrichopsis omnivora, Causal Fungus of Cotton Root Rot
M Arif, S Dobhal, PA Garrido, GK Orquera, AS Espíndola, CA Young, ...
Plant Disease 98 (9), 1205-1212, 2014
102014
Genome analysis of Spiroplasma citri strains from different host plants and its leafhopper vectors
R Rattner, SP Thapa, T Dang, F Osman, V Selvaraj, Y Maheshwari, ...
BMC genomics 22 (1), 373, 2021
92021
E-probe: A new diagnostic tool for detection of Dichorhaviruses associated with Citrus leprosis syndrome
A Espindola, A Roy, VA Mavrodieva, KF Cardwell
Plant Health 2019, 2019
52019
Detecting viruses and bacteria of grapevine with Microbe Finder (MiFi) and an Oxford Nanopore sequencer
A Espindola, V Freire-Zapata, LFM Watanabe, FO Corona, KF Cardwell
Plant Health 2019, 2019
52019
Detection of multiple oomycetes in metagenomic data by Using E-probe Detection of Nucleic Analysis (EDNA)
MF Proano, A Espindola, CD Garzon
International Congress of Plant Pathology (ICPP) 2018: Plant Health in A …, 2018
52018
E-probes development for rapid, sensitive and specific pathogen detection in blueberries
AM Bocsanczy, A Espindola, DJ Norman, KF Cardwell
International Congress of Plant Pathology (ICPP) 2018: Plant Health in A …, 2018
52018
Development and statistical validation of e-probe diagnostic nucleic acid analysis (EDNA) assays for the detection of citrus pathogens from raw high-throughput sequencing data
T Dang, H Wang, AS Espindola, J Habiger, G Vidalakis, K Cardwell
PhytoFrontiers™ 3 (1), 113-123, 2023
42023
Detection of Phytophthora, Pythium, Globisporangium, Hyaloperonospora and Plasmopara species in High-Throughput Sequencing data by in silico and in vitro analysis using Microbe …
F Proaño Cuenca, AS Espindola, C Garzon
PhytoFrontiers, 2022
42022
Detection of cucurbit viruses in Oklahoma combining EDNA with Multiplex RT-PCR coupled with High Resolution Melting
LP Zuniga, A Espindola, HA Melouk, A Ali, KF Cardwell, FO Corona
2017 APS Annual Meeting, 2017
42017
EDNA-Rose a novel approach for detecting rose viruses combining next generation sequencing and bioinformatics
LP Zuniga, A Espindola, P Klein, T Debener, J Rees, D Byrne, ...
2017 APS Annual Meeting, 2017
42017
Microbe Finder (MiFi): Pathogen detection in metagenomic sequence data
A Espindola, KF Cardwell
Plant Health 2019, 2019
32019
New Technologies from the Microbial World: Alternatives for Biomedical Surrogate Research
F Ochoa-Corona, K Cardwell, AS Espindola
Advances in Biotechnology and Microbiology 13 (2), 37-40, 2019
32019
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