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Davide Sala
Davide Sala
Axxam, Milan
Email verificata su axxam.com - Home page
Titolo
Citata da
Citata da
Anno
Sampling alternative conformational states of transporters and receptors with AlphaFold2
D Del Alamo, D Sala, HS Mchaourab, J Meiler
Elife 11, e75751, 2022
2002022
Modeling conformational states of proteins with AlphaFold
D Sala, F Engelberger, HS Mchaourab, J Meiler
Current Opinion in Structural Biology 81, 102645, 2023
342023
Investigation of the iron (II) release mechanism of human H-ferritin as a function of pH
D Sala, S Ciambellotti, A Giachetti, P Turano, A Rosato
Journal of Chemical Information and Modeling 57 (9), 2112-2118, 2017
262017
Protein structure prediction assisted with sparse NMR data in CASP13
D Sala, YJ Huang, CA Cole, DA Snyder, G Liu, Y Ishida, GVT Swapna, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1315-1332, 2019
202019
Biasing AlphaFold2 to predict GPCRs and Kinases with user-defined functional or structural properties
D Sala, P Hildebrand, J Meiler
Frontiers in Molecular Biosciences 10, 1121962, 2023
192023
Modeling of protein conformational changes with Rosetta guided by limited experimental data
D Sala, D Del Alamo, HS Mchaourab, J Meiler
Structure 30 (8), 1157-1168. e3, 2022
172022
Speeding up the identification of cystic fibrosis transmembrane conductance regulator-targeted drugs: an approach based on bioinformatics strategies and surface plasmon resonance
M Rusnati, D Sala, A Orro, A Bugatti, G Trombetti, E Cichero, C Urbinati, ...
Molecules 23 (1), 120, 2018
152018
An atomistic view of the YiiP structural changes upon zinc (II) binding
D Sala, A Giachetti, A Rosato
Biochimica et Biophysica Acta (BBA)-General Subjects 1863 (10), 1560-1567, 2019
142019
Application of molecular dynamics to the investigation of metalloproteins involved in metal homeostasis
D Sala, F Musiani, A Rosato
European journal of inorganic chemistry 2018 (43), 4661-4677, 2018
122018
Insights into the dynamics of the human zinc transporter ZnT8 by MD simulations
D Sala, A Giachetti, A Rosato
Journal of Chemical Information and Modeling 61 (2), 901-912, 2021
102021
A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions
D Sala, A Giachetti, C Luchinat, A Rosato
Journal of biomolecular NMR 66, 175-185, 2016
102016
Targeting in silico GPCR conformations with ultra-large library screening for hit discovery
D Sala, H Batebi, K Ledwitch, PW Hildebrand, J Meiler
Trends in Pharmacological Sciences 44 (3), 150-161, 2023
82023
Learning to identify physiological and adventitious metal-binding sites in the three-dimensional structures of proteins by following the hints of a deep neural network
V Laveglia, A Giachetti, D Sala, C Andreini, A Rosato
Journal of Chemical Information and Modeling 62 (12), 2951-2960, 2022
62022
Molecular dynamics simulations of metalloproteins: A folding study of rubredoxin from Pyrococcus furiosus
D Sala, A Giachetti, A Rosato
AIMS BIOPHYSICS 5, 77-96, 2018
52018
A protocol to automatically calculate homo-oligomeric protein structures through the integration of evolutionary constraints and NMR ambiguous contacts
D Sala, L Cerofolini, M Fragai, A Giachetti, C Luchinat, A Rosato
Computational and Structural Biotechnology Journal 18, 114-124, 2020
42020
Dynamical Behavior and Conformational Selection Mechanism of the Intrinsically Disordered Sic1 Kinase-Inhibitor Domain
D Sala, U Cosentino, A Ranaudo, C Greco, G Moro
Life 10 (7), 110, 2020
32020
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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