Follow
Ali Navid
Title
Cited by
Cited by
Year
Genome-level transcription data of Yersinia pestis analyzed with a New metabolic constraint-based approach
A Navid, E Almaas
BMC systems biology 6, 1-18, 2012
872012
Do genome‐scale models need exact solvers or clearer standards?
A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ...
Molecular systems biology 11 (10), 831, 2015
642015
Combining multiple functional annotation tools increases coverage of metabolic annotation
M Griesemer, JA Kimbrel, CE Zhou, A Navid, P D’haeseleer
BMC genomics 19, 1-11, 2018
502018
Genome-scale reconstruction of the metabolic network in Yersinia pestis, strain 91001
A Navid, E Almaas
Molecular bioSystems 5 (4), 368-375, 2009
462009
Syntrophic metabolism of a co-culture containing Clostridium cellulolyticum and Rhodopseudomonas palustris for hydrogen production
Y Jiao, A Navid, BJ Stewart, JB McKinlay, MP Thelen, J Pett-Ridge
international journal of hydrogen energy 37 (16), 11719-11726, 2012
362012
D‐Lactate production as a function of glucose metabolism in Saccharomyces cerevisiae
BJ Stewart, A Navid, KS Kulp, JLS Knaack, G Bench
Yeast 30 (2), 81-91, 2013
272013
Rapid countermeasure discovery against Francisella tularensis based on a metabolic network reconstruction
S Chaudhury, MDM Abdulhameed, N Singh, GJ Tawa, PM D’haeseleer, ...
PLoS One 8 (5), e63369, 2013
262013
The Karyote® Physico-Chemical Genomic, Proteomic, Metabolic Cell Modeling System
P Ortoleva, E Berry, Y Brun, J Fan, M Fontus, K Hubbard, K Jaqaman, ...
OMICS A Journal of Integrative Biology 7 (3), 269-283, 2003
262003
Collagen turnover in relation to risk factors and hemodynamics in human intracranial aneurysms
KAM Hackenberg, H Rajabzadeh-Oghaz, R Dreier, BA Buchholz, A Navid, ...
Stroke 51 (5), 1624-1628, 2020
222020
System-level analysis of metabolic trade-offs during anaerobic photoheterotrophic growth in Rhodopseudomonas palustris
A Navid, Y Jiao, SE Wong, J Pett-Ridge
BMC bioinformatics 20, 1-16, 2019
222019
Yeast dynamic metabolic flux measurement in nutrient-rich media by HPLC and accelerator mass spectrometry
BJ Stewart, A Navid, KW Turteltaub, G Bench
Analytical chemistry 82 (23), 9812-9817, 2010
192010
Simulated complex dynamics of glycolysis in the protozoan parasite Trypanosoma brucei
A Navid, PJ Ortoleva
Journal of Theoretical Biology 228 (4), 449-458, 2004
192004
Applications of system-level models of metabolism for analysis of bacterial physiology and identification of new drug targets
A Navid
Briefings in functional genomics 10 (6), 354-364, 2011
152011
A proposed role for all-trans retinal in regulation of rhodopsin regeneration in human rods
A Navid, SC Nicholas, RD Hamer
Vision research 46 (27), 4449-4463, 2006
112006
Quantitative In Silico analysis of transient metabolism of acetaminophen and associated causes of hepatotoxicity in humans
A Navid, DM Ng, BJ Stewart, SE Wong, FC Lightstone
In Silico Pharmacology 1, 1-12, 2013
102013
Application of a physiologically based pharmacokinetic model to study theophylline metabolism and its interactions with ciprofloxacin and caffeine
A Navid, DM Ng, SE Wong, FC Lightstone
CPT: Pharmacometrics & Systems Pharmacology 5 (2), 74-81, 2016
92016
UV‐vis and binding studies of cobalt tetrasulfophthalocyanine–thiolate complexes as intermediates of the Merox process
A Navid, EM Tyapochkin, CJ Archer, EI Kozliak
Journal of Porphyrins and Phthalocyanines 3 (6‐7), 654-666, 1999
91999
Microbial systems biology: methods and protocols
J Pett-Ridge, PK Weber, A Navid
Humana, 2012
72012
Systems biology of microbial communities
A Navid, CM Ghim, AT Fenley, S Yoon, S Lee, E Almaas
Systems Biology, 469-494, 2009
62009
Electrogenetic signaling and information propagation for controlling microbial consortia via programmed lysis
E VanArsdale, A Navid, MJ Chu, TM Halvorsen, GF Payne, Y Jiao, ...
Biotechnology and Bioengineering 120 (5), 1366-1381, 2023
52023
The system can't perform the operation now. Try again later.
Articles 1–20