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T. Jeffrey Cole
T. Jeffrey Cole
Postdoctoral Researcher
Verified email at utexas.edu - Homepage
Title
Cited by
Cited by
Year
TOXIFY: a deep learning approach to classify animal venom proteins
TJ Cole, MS Brewer
PeerJ 7, e7200, 2019
252019
FUSTr: a tool to find gene families under selection in transcriptomes
TJ Cole, MS Brewer
PeerJ 6, e4234, 2018
152018
The phylogeny of robber flies (Asilidae) inferred from ultraconserved elements
CM Cohen, K Noble, T Jeffrey Cole, MS Brewer
Systematic Entomology 46 (4), 812-826, 2021
122021
Evidence for Widespread Class II Microcins in Enterobacterales Genomes
TJ Cole, JK Parker, AL Feller, CO Wilke, BW Davies
Applied and Environmental Microbiology 88 (23), e01486-22, 2022
92022
ExoDx prostate test as a predictor of outcomes of high-grade prostate cancer–An interim analysis
R Tutrone, B Lowentritt, B Neuman, MJ Donovan, E Hallmark, TJ Cole, ...
Prostate Cancer and Prostatic Diseases 26 (3), 596-601, 2023
72023
Synthetic antibacterial discovery of symbah-1, a macrocyclic β-hairpin peptide antibiotic
JR Randall, G Davidson, RM Fleeman, SA Acosta, IM Riddington, TJ Cole, ...
Iscience 25 (1), 2022
72022
Designing and identifying β-hairpin peptide macrocycles with antibiotic potential
JR Randall, CD DuPai, TJ Cole, G Davidson, KE Groover, SL Slater, ...
Science Advances 9 (2), eade0008, 2023
52023
Two sequence-and two structure-based ML models have learned different aspects of protein biochemistry
AV Kulikova, DJ Diaz, T Chen, TJ Cole, AD Ellington, CO Wilke
Scientific Reports 13 (1), 13280, 2023
4*2023
Killer knots: Molecular evolution of inhibitor cystine knot toxins in Wandering spiders (Araneae: Ctenidae)
MS Brewer, TJ Cole
Toxins 15 (2), 112, 2023
42023
Pick your poison: Molecular evolution of venom proteins in Asilidae (Insecta: Diptera)
CM Cohen, TJ Cole, MS Brewer
Toxins 12 (12), 738, 2020
32020
Prescribed burning affects a measure of fitness in Ctenus hibernalis (Araneae: Ctenidae) at Oak Mountain State Park, Shelby county, AL
TJ Cole, RA Hataway
Southeastern naturalist 15 (4), 646-652, 2016
32016
Killer Knots: Molecular evolution of Inhibitor Cystine Knot toxins in wandering spiders (Araneae: Ctenidae)
TJ Cole, MS Brewer
bioRxiv, 2021.07. 28.453581, 2021
22021
Ultraconserved elements help resolve the phylogeny of an ancient radiation of venomous flies (Diptera: Asilidae)
CM Cohen, K Noble, TJ Cole, MS Brewer
bioRxiv, 2020.11. 09.375196, 2020
12020
Characterization of the proteome for the wandering spider, Ctenus hibernalis (Aranea: Ctenidae)
TJ Cole, PA Buszka, JA Mobley, RA Hataway
Toxicon 100 (119), 373-374, 2016
12016
Under pressure: evidence for selection on color-related genes in poison frogs of the genus Ranitomeya
AO Rubio, AMM Stuckert, TM LaPolice, TJ Cole, K Summers
Evolutionary Ecology, 1-17, 2024
2024
Correction to: ExoDx prostate test as a predictor of outcomes of high-grade prostate cancer–an interim analysis
R Tutrone, B Lowentritt, B Neuman, MJ Donovan, E Hallmark, TJ Cole, ...
Prostate Cancer and Prostatic Diseases 27 (1), 161, 2024
2024
Adapting antibacterial display to identify serum-active macrocyclic peptide antibiotics
JR Randall, KE Groover, AC O'Donnell, JM Garza, TJ Cole, BW Davies
PNAS nexus 2 (8), pgad270, 2023
2023
Designing β-hairpin peptide macrocycles for antibiotic potential
JR Randall, CD DuPai, TJ Cole, G Davidson, KE Groover, CO Wilke, ...
bioRxiv, 2022.06. 21.497034, 2022
2022
Molecular evolution of venom proteins in Ctenidae (Order: Araneae) spiders
TJ Cole
East Carolina University, 2021
2021
Pick Your Poison: Molecular Evolution of Venom Proteins in Asilidae (Insecta: Diptera)
MS Brewer, TJ Cole
2020
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