| Neofunctionalization of young duplicate genes in Drosophila R Assis, D Bachtrog Proceedings of the National Academy of Sciences 110 (43), 17409-17414, 2013 | 211 | 2013 |
| Sex-Biased Transcriptome Evolution in Drosophila R Assis, Q Zhou, D Bachtrog Genome biology and evolution 4 (11), 1189-1200, 2012 | 188 | 2012 |
| Rapid repetitive element-mediated expansion of piRNA clusters in mammalian evolution R Assis, AS Kondrashov Proceedings of the National Academy of Sciences 106 (17), 7079-7082, 2009 | 70 | 2009 |
| Rapid divergence and diversification of mammalian duplicate gene functions R Assis, D Bachtrog BMC evolutionary biology 15, 1-7, 2015 | 60 | 2015 |
| Nested genes and increasing organizational complexity of metazoan genomes R Assis, AS Kondrashov, EV Koonin, FA Kondrashov Trends in Genetics 24 (10), 475-478, 2008 | 57 | 2008 |
| Natural Selection Drives Rapid Functional Evolution of Young Drosophila Duplicate Genes X Jiang, R Assis Molecular Biology and Evolution 34 (12), 3089-3098, 2017 | 34 | 2017 |
| Rapid functional divergence after small-scale gene duplication in grasses X Jiang, R Assis BMC Evolutionary Biology 19, 1-11, 2019 | 24* | 2019 |
| Conserved proteins are fragile R Assis, AS Kondrashov Molecular biology and evolution 31 (2), 419-424, 2014 | 23 | 2014 |
| Drosophila duplicate genes evolve new functions on the fly R Assis Fly 8 (2), 91-94, 2014 | 17 | 2014 |
| Nonallelic Gene Conversion Is Not GC-Biased in Drosophila or Primates R Assis, AS Kondrashov Molecular biology and evolution 29 (5), 1291-1295, 2012 | 15 | 2012 |
| A strong deletion bias in nonallelic gene conversion R Assis, AS Kondrashov PLoS genetics 8 (2), e1002508, 2012 | 15 | 2012 |
| CDROM: Classification of duplicate gene retention mechanisms BR Perry, R Assis BMC evolutionary biology 16, 1-4, 2016 | 14 | 2016 |
| Strong epistatic selection on the RNA secondary structure of HIV R Assis PLoS pathogens 10 (9), e1004363, 2014 | 14 | 2014 |
| Out of the testis, into the ovary: biased outcomes of gene duplication and deletion in Drosophila R Assis Evolution 73 (9), 1850-1862, 2019 | 11 | 2019 |
| Learning retention mechanisms and evolutionary parameters of duplicate genes from their expression data M DeGiorgio, R Assis Molecular Biology and Evolution 38 (3), 1209-1224, 2021 | 9 | 2021 |
| Lineage-specific expression divergence in grasses is associated with male reproduction, host-pathogen defense, and domestication R Assis Genome biology and evolution 11 (1), 207-219, 2019 | 9 | 2019 |
| Transcriptional Interference Promotes Rapid Expression Divergence of Drosophila Nested Genes R Assis Genome biology and evolution 8 (10), 3149-3158, 2016 | 6 | 2016 |
| Population-specific genetic and expression differentiation in Europeans X Jiang, R Assis Genome biology and evolution 12 (4), 358-369, 2020 | 5 | 2020 |
| Predicting gene expression divergence between single-copy orthologs in two species AA Piya, M DeGiorgio, R Assis Genome Biology and Evolution 15 (5), evad078, 2023 | 3 | 2023 |
| Bridges: a tool for identifying local similarities in long sequences AS Kondrashov, R Assis Bioinformatics 26 (16), 2055-2056, 2010 | 3 | 2010 |
Doris BachtrogProfessor of Evolutionary Genomics, University of California BerkeleyVerified email at berkeley.edu
