| Predicting human olfactory perception from chemical features of odor molecules A Keller, RC Gerkin, Y Guan, A Dhurandhar, G Turu, B Szalai, ... Science 355 (6327), 820-826, 2017 | 286 | 2017 |
| The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires M Pavlović, L Scheffer, K Motwani, C Kanduri, R Kompova, N Vazov, ... Nature Machine Intelligence 3 (11), 936-944, 2021 | 62 | 2021 |
| Effect of de novo transcriptome assembly on transcript quantification PH Hsieh, YJ Oyang, CY Chen Scientific reports 9 (1), 8304, 2019 | 44 | 2019 |
| GenEpi: gene-based epistasis discovery using machine learning YC Chang, JT Wu, MY Hong, YA Tung, PH Hsieh, SW Yee, KM Giacomini, ... BMC bioinformatics 21, 1-13, 2020 | 34 | 2020 |
| lionessR: single sample network inference in R ML Kuijjer, PH Hsieh, J Quackenbush, K Glass BMC cancer 19, 1-6, 2019 | 29 | 2019 |
| Whole-genome de novo sequencing reveals unique genes that contributed to the adaptive evolution of the Mikado pheasant CY Lee, PH Hsieh, LM Chiang, A Chattopadhyay, KY Li, YF Lee, TP Lu, ... GigaScience 7 (5), giy044, 2018 | 10 | 2018 |
| Adjustment of spurious correlations in co-expression measurements from RNA-Sequencing data PH Hsieh, CM Lopes-Ramos, M Zucknick, GK Sandve, K Glass, ... Bioinformatics 39 (10), btad610, 2023 | 4 | 2023 |
| Heterogeneity in the gene regulatory landscape of leiomyosarcoma T Belova, N Biondi, PH Hsieh, P Lutsik, P Chudasama, ML Kuijjer NAR cancer 5 (3), zcad037, 2023 | 3 | 2023 |
| Global transcriptome analysis reveals distinct phases of the endothelial response to TNF EC Struck, T Belova, PH Hsieh, JO Odeberg, ML Kuijjer, PJ Dusart, ... The Journal of Immunology Author Choice 212 (1), 117, 2024 | 2 | 2024 |
| CAVACHON: a hierarchical variational autoencoder to integrate multi-modal single-cell data PH Hsieh, RX Hsiao, K Ferenc, A Mathelier, R Burkholz, CY Chen, ... arXiv preprint arXiv:2405.18655, 2024 | | 2024 |
| Temporal transcriptome analysis of the endothelial response to tumour necrosis factor EC Struck, T Belova, P Hsieh, J Odeberg, ML Kuijjer, P Dusart, LM Butler bioRxiv, 2023.06. 04.543378, 2023 | | 2023 |
| Author Correction: Effect of de novo transcriptome assembly on transcript quantification PH Hsieh, YJ Oyang, CY Chen Scientific Reports 9, 2019 | | 2019 |
| Using hierarchical variational autoencoders to incorporate conditional independent priors for paired single-cell multi-omics data integration PH Hsieh, RX Hsiao, T Belova, K Ferenc, A Mathelier, R Burkholz, ... NeurIPS 2022 Workshop on Learning Meaningful Representations of Life, 0 | | |
Chien-Yu Chen National Taiwan UniversityVerified email at ntu.edu.tw
