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Katherine Amrine
Katherine Amrine
Postdoc, UC Davis
Verified email at ucdavis.edu
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Cited by
Cited by
Year
Adaptive genomic structural variation in the grape powdery mildew pathogen, Erysiphe necator
L Jones, S Riaz, A Morales-Cruz, KCH Amrine, B McGuire, WD Gubler, ...
BMC genomics 15, 1-18, 2014
1772014
Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens
A Morales-Cruz, KCH Amrine, B Blanco-Ulate, DP Lawrence, R Travadon, ...
BMC genomics 16, 1-22, 2015
1602015
Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts
B Blanco-Ulate, A Morales-Cruz, KCH Amrine, JM Labavitch, ALT Powell, ...
Frontiers in plant science 5, 98301, 2014
1432014
Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot
B Blanco-Ulate, KCH Amrine, TS Collins, RM Rivero, AR Vicente, ...
Plant physiology 169 (4), 2422-2443, 2015
1262015
Crystal structure of the transcriptional regulator AcrR from Escherichia coli
M Li, R Gu, CC Su, MD Routh, KC Harris, ES Jewell, G McDermott, ...
Journal of molecular biology 374 (3), 591-603, 2007
992007
Discovery of core biotic stress responsive genes in Arabidopsis by weighted gene co-expression network analysis
KCH Amrine, B Blanco-Ulate, D Cantu
PloS one 10 (3), e0118731, 2015
882015
Comparative transcriptomics of Central Asian Vitis vinifera accessions reveals distinct defense strategies against powdery mildew
KCH Amrine, B Blanco-Ulate, S Riaz, D Pap, L Jones, ...
Horticulture Research 2, 2015
572015
FAST: FAST analysis of sequences toolbox
TJ Lawrence, KT Kauffman, KCH Amrine, DL Carper, RS Lee, PJ Becich, ...
Frontiers in genetics 6, 136911, 2015
322015
Lineage-specific differences in the amino acid substitution process
S Huzurbazar, G Kolesov, SE Massey, KC Harris, A Churbanov, ...
Journal of molecular biology 396 (5), 1410-1421, 2010
202010
tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria
KCH Amrine, WD Swingley, DH Ardell
PLoS computational biology 10 (2), e1003454, 2014
82014
tRNA functional signatures classify plastids as late-branching cyanobacteria
TJ Lawrence, KCH Amrine, WD Swingley, DH Ardell
BMC evolutionary biology 19, 1-13, 2019
42019
Robust Estimation of the Phylogenetic Origin of Plastids Using a tRNA-Based Phyloclassifier
TJ Lawrence, KCH Amrine, WD Swingley, DH Ardell
bioRxiv, 442608, 2018
2018
Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens
D Cantu, K Baumgartner, PE Rolshausen, R Travadon, DP Lawrence, ...
2015
Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts
KCH Amrine, JM Labavitch
2014
Detecting Phylogenetic Signals From Deep Roots of the Tree of Life
KCH Amrine
University of California, Merced, 2013
2013
Exploring the origin of chloroplast using the tRNA-protein interaction network
TJ Lawrence, K Amrine, W Swingley, D Ardell
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Articles 1–16