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Li Chen
Li Chen
Associate Professor of Biostatistics, University of Florida
Verified email at ufl.edu - Homepage
Title
Cited by
Cited by
Year
Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates
H Wu, T Xu, H Feng, L Chen, B Li, B Yao, Z Qin, P Jin, KN Conneely
Nucleic acids research 43 (21), e141-e141, 2015
3102015
Small molecules efficiently reprogram human astroglial cells into functional neurons
L Zhang, JC Yin, H Yeh, NX Ma, G Lee, XA Chen, Y Wang, L Lin, L Chen, ...
Cell stem cell 17 (6), 735-747, 2015
2932015
GMPR: A robust normalization method for zero-inflated count data with application to microbiome sequencing data
L Chen, J Reeve, L Zhang, S Huang, X Wang, J Chen
PeerJ 6, e4600, 2018
2002018
DNA N6-methyladenine is dynamically regulated in the mouse brain following environmental stress
B Yao, Y Cheng, Z Wang, Y Li, L Chen, L Huang, W Zhang, D Chen, H Wu, ...
Nature communications 8 (1), 1-10, 2017
1972017
Molecular signatures associated with ZIKV exposure in human cortical neural progenitors
F Zhang, C Hammack, SC Ogden, Y Cheng, EM Lee, Z Wen, X Qian, ...
Nucleic acids research 44 (18), 8610-8620, 2016
1802016
Tet2 loss leads to hypermutagenicity in haematopoietic stem/progenitor cells
F Pan, TS Wingo, Z Zhao, R Gao, H Makishima, G Qu, L Lin, M Yu, ...
Nature communications 8 (1), 1-10, 2017
1152017
Combined loss of Tet1 and Tet2 promotes B cell, but not myeloid malignancies, in mice
Z Zhao, L Chen, MM Dawlaty, F Pan, O Weeks, Y Zhou, Z Cao, H Shi, ...
Cell reports 13 (8), 1692-1704, 2015
1132015
Ten-eleven translocation 2 interacts with forkhead box O3 and regulates adult neurogenesis
X Li, B Yao, L Chen, Y Kang, Y Li, Y Cheng, L Li, L Lin, Z Wang, M Wang, ...
Nature communications 8 (1), 1-14, 2017
972017
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies
Z Sun, L Chen, H Xin, Y Jiang, Q Huang, AR Cillo, T Tabib, JK Kolls, ...
Nature communications 10 (1), 1-10, 2019
692019
DIVAN: accurate identification of non-coding disease-specific risk variants using multi-omics profiles
L Chen, P Jin, ZS Qin
Genome biology 17 (1), 1-21, 2016
672016
Active N6-methyladenine demethylation by DMAD regulates gene expression by coordinating with polycomb protein in neurons
B Yao, Y Li, Z Wang, L Chen, M Poidevin, C Zhang, L Lin, F Wang, H Bao, ...
Molecular cell 71 (5), 848-857. e6, 2018
662018
Altering 5-hydroxymethylcytosine modification impacts ischemic brain injury
Z Miao, Y He, N Xin, M Sun, L Chen, L Lin, J Li, J Kong, P Jin, X Xu
Human molecular genetics 24 (20), 5855-5866, 2015
612015
A novel statistical method for quantitative comparison of multiple ChIP-seq datasets
L Chen, C Wang, ZS Qin, H Wu
Bioinformatics 31 (12), 1889-1896, 2015
612015
hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data
L Chen, G Wu, H Ji
Bioinformatics 27 (10), 1447-1448, 2011
552011
Ten-Eleven Translocation Proteins Modulate the Response to Environmental Stress in Mice
Y Cheng, M Sun, L Chen, Y Li, L Lin, B Yao, Z Li, Z Wang, J Chen, Z Miao, ...
Cell reports 25 (11), 3194-3203. e4, 2018
542018
Genome-wide alterations in hippocampal 5-hydroxymethylcytosine links plasticity genes to acute stress
S Li, LA Papale, Q Zhang, A Madrid, L Chen, P Chopra, S Keleş, P Jin, ...
Neurobiology of disease 86, 99-108, 2016
532016
Predictive modeling of microbiome data using a phylogeny-regularized generalized linear mixed model
J Xiao, L Chen, S Johnson, Y Yu, X Zhang, J Chen
Frontiers in microbiology 9, 1391, 2018
452018
Genome-wide circadian rhythm detection methods: systematic evaluations and practical guidelines
JY Mei W, Jiang Z, Chen Y, Chen L, Sancar A
Briefings in Bioinformatics, 1-13, 2020
35*2020
5-Hydroxymethylcytosine-mediated alteration of transposon activity associated with the exposure to adverse in utero environments in human
M Sun, MM Song, B Wei, Q Gao, L Li, B Yao, L Chen, L Lin, Q Dai, X Zhou, ...
Human molecular genetics 25 (11), 2208-2219, 2016
302016
Destin: toolkit for single-cell analysis of chromatin accessibility
E Urrutia, L Chen, H Zhou, Y Jiang
Bioinformatics 35 (19), 3818-3820, 2019
282019
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Articles 1–20