| Protein docking using continuum electrostatics and geometric fit JG Mandell, VA Roberts, ME Pique, V Kotlovyi, JC Mitchell, E Nelson, ... Protein engineering 14 (2), 105-113, 2001 | 420 | 2001 |
| An automated decision‐tree approach to predicting protein interaction hot spots SJ Darnell, D Page, JC Mitchell Proteins: Structure, Function, and Bioinformatics 68 (4), 813-823, 2007 | 250 | 2007 |
| KFC2: a knowledge‐based hot spot prediction method based on interface solvation, atomic density, and plasticity features X Zhu, JC Mitchell Proteins: Structure, Function, and Bioinformatics 79 (9), 2671-2683, 2011 | 242 | 2011 |
| Generating Uniform Incremental Grids on SO(3) Using the Hopf Fibration A Yershova, S Jain, SM Lavalle, JC Mitchell The International journal of robotics research 29 (7), 801-812, 2010 | 233 | 2010 |
| Extracellular matrix production by human osteoblasts cultured on biodegradable polymers applicable for tissue engineering SF El-Amin, HH Lu, Y Khan, J Burems, J Mitchell, RS Tuan, CT Laurencin Biomaterials 24 (7), 1213-1221, 2003 | 222 | 2003 |
| CryptoSite: expanding the druggable proteome by characterization and prediction of cryptic binding sites P Cimermancic, P Weinkam, TJ Rettenmaier, L Bichmann, DA Keedy, ... Journal of molecular biology 428 (4), 709-719, 2016 | 187 | 2016 |
| KFC Server: interactive forecasting of protein interaction hot spots SJ Darnell, L LeGault, JC Mitchell Nucleic acids research 36 (suppl_2), W265-W269, 2008 | 174 | 2008 |
| Supercomputer-based ensemble docking drug discovery pipeline with application to COVID-19 A Acharya, R Agarwal, MB Baker, J Baudry, D Bhowmik, S Boehm, ... Journal of chemical information and modeling 60 (12), 5832-5852, 2020 | 157 | 2020 |
| Community-wide assessment of protein-interface modeling suggests improvements to design methodology SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ... Journal of molecular biology 414 (2), 289-302, 2011 | 156 | 2011 |
| Mitochondrial COQ9 is a lipid-binding protein that associates with COQ7 to enable coenzyme Q biosynthesis DC Lohman, F Forouhar, ET Beebe, MS Stefely, CE Minogue, A Ulbrich, ... Proceedings of the National Academy of Sciences 111 (44), E4697-E4705, 2014 | 135 | 2014 |
| Structural analysis and modeling reveals new mechanisms governing ESCRT-III spiral filament assembly QT Shen, AL Schuh, Y Zheng, K Quinney, L Wang, M Hanna, JC Mitchell, ... Journal of Cell Biology 206 (6), 763-777, 2014 | 126 | 2014 |
| Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions R Moretti, SJ Fleishman, R Agius, M Torchala, PA Bates, PL Kastritis, ... Proteins: Structure, Function, and Bioinformatics 81 (11), 1980-1987, 2013 | 111 | 2013 |
| Rapid atomic density methods for molecular shape characterization JC Mitchell, R Kerr, LF Ten Eyck Journal of Molecular Graphics and Modelling 19 (3-4), 325-330, 2001 | 101 | 2001 |
| Disruption of shape-complementarity markers to create cytotoxic variants of ribonuclease A TJ Rutkoski, EL Kurten, JC Mitchell, RT Raines Journal of molecular biology 354 (1), 41-54, 2005 | 92 | 2005 |
| Synaptotagmin C2A Loop 2 Mediates Ca2+-dependent SNARE Interactions Essential for Ca2+-triggered Vesicle Exocytosis KL Lynch, RRL Gerona, EC Larsen, RF Marcia, JC Mitchell, TFJ Martin Molecular biology of the cell 18 (12), 4957-4968, 2007 | 90 | 2007 |
| Structure-based predictive models for allosteric hot spots ONA Demerdash, MD Daily, JC Mitchell PLoS computational biology 5 (10), e1000531, 2009 | 74 | 2009 |
| Sampling rotation groups by successive orthogonal images JC Mitchell SIAM Journal on Scientific Computing 30 (1), 525-547, 2008 | 70 | 2008 |
| Blind prediction of interfacial water positions in CAPRI MF Lensink, IH Moal, PA Bates, PL Kastritis, ASJ Melquiond, E Karaca, ... Proteins: Structure, Function, and Bioinformatics 82 (4), 620-632, 2014 | 61 | 2014 |
| Charge and hydrophobicity patterning along the sequence predicts the folding mechanism and aggregation of proteins: a computational approach JP Zbilut, A Giuliani, A Colosimo, JC Mitchell, M Colafranceschi, ... Journal of proteome research 3 (6), 1243-1253, 2004 | 56 | 2004 |
| Protein folds vs. protein folding: Differing questions, different challenges SJ Chen, M Hassan, RL Jernigan, K Jia, D Kihara, A Kloczkowski, ... Proceedings of the National Academy of Sciences 120 (1), e2214423119, 2023 | 50 | 2023 |
