| DeepARG: a deep learning approach for predicting antibiotic resistance genes from metagenomic data G Arango-Argoty, E Garner, A Pruden, LS Heath, P Vikesland, L Zhang Microbiome 6, 1-15, 2018 | 562 | 2018 |
| Effect of manure application on abundance of antibiotic resistance genes and their attenuation rates in soil: field-scale mass balance approach N Fahrenfeld, K Knowlton, LA Krometis, WC Hession, K Xia, E Lipscomb, ... Environmental science & technology 48 (5), 2643-2650, 2014 | 224 | 2014 |
| Biofilms as a sink for antibiotic resistance genes (ARGs) in the Yangtze Estuary X Guo, Y Yang, D Lu, Z Niu, J Feng, Y Chen, F Tou, E Garner, J Xu, M Liu, ... Water Research 129, 277-286, 2018 | 215 | 2018 |
| Differential drivers of antimicrobial resistance across the world P Vikesland, E Garner, S Gupta, S Kang, A Maile-Moskowitz, NI Zhu Accounts of chemical research 52 (4), 916-924, 2019 | 189 | 2019 |
| Metagenomic characterization of antibiotic resistance genes in full-scale reclaimed water distribution systems and corresponding potable systems E Garner, C Chen, K Xia, J Bowers, DM Engelthaler, J McLain, ... Environmental science & technology 52 (11), 6113-6125, 2018 | 145 | 2018 |
| Occurrence and transformation of veterinary antibiotics and antibiotic resistance genes in dairy manure treated by advanced anaerobic digestion and conventional treatment methods JS Wallace, E Garner, A Pruden, DS Aga Environmental pollution 236, 764-772, 2018 | 131 | 2018 |
| Stormwater loadings of antibiotic resistance genes in an urban stream E Garner, R Benitez, E von Wagoner, R Sawyer, E Schaberg, ... Water research 123, 144-152, 2017 | 120 | 2017 |
| Legionella DNA Markers in Tap Water Coincident with a Spike in Legionnaires’ Disease in Flint, MI DO Schwake, E Garner, OR Strom, A Pruden, MA Edwards Environmental Science & Technology Letters 3 (9), 311-315, 2016 | 108 | 2016 |
| Distribution system operational deficiencies coincide with reported Legionnaires’ disease clusters in Flint, Michigan WJ Rhoads, E Garner, P Ji, N Zhu, J Parks, DO Schwake, A Pruden, ... Environmental science & technology 51 (20), 11986-11995, 2017 | 87 | 2017 |
| Microbial ecology and water chemistry impact regrowth of opportunistic pathogens in full-scale reclaimed water distribution systems E Garner, J McLain, J Bowers, DM Engelthaler, MA Edwards, A Pruden Environmental science & technology 52 (16), 9056-9068, 2018 | 79 | 2018 |
| Next generation sequencing approaches to evaluate water and wastewater quality E Garner, BC Davis, E Milligan, MF Blair, I Keenum, A Maile-Moskowitz, ... Water Research 194, 116907, 2021 | 77 | 2021 |
| Metagenomic profiling of historic Colorado Front Range flood impact on distribution of riverine antibiotic resistance genes E Garner, JS Wallace, GA Argoty, C Wilkinson, N Fahrenfeld, LS Heath, ... Scientific reports 6 (1), 38432, 2016 | 72 | 2016 |
| A human exposome framework for guiding risk management and holistic assessment of recycled water quality E Garner, N Zhu, L Strom, M Edwards, A Pruden Environmental Science: Water Research & Technology 2 (4), 580-598, 2016 | 60 | 2016 |
| Towards a harmonized method for the global reconnaissance of multi-class antimicrobials and other pharmaceuticals in wastewater and receiving surface waters RR Singh, LF Angeles, DM Butryn, JW Metch, E Garner, PJ Vikesland, ... Environment international 124, 361-369, 2019 | 57 | 2019 |
| Evaluation of metagenomic-enabled antibiotic resistance surveillance at a conventional wastewater treatment plant HJ Majeed, MV Riquelme, BC Davis, S Gupta, L Angeles, DS Aga, ... Frontiers in microbiology 12, 657954, 2021 | 54 | 2021 |
| Impact of blending for direct potable reuse on premise plumbing microbial ecology and regrowth of opportunistic pathogens and antibiotic resistant bacteria E Garner, M Inyang, E Garvey, J Parks, C Glover, A Grimaldi, E Dickenson, ... Water research 151, 75-86, 2019 | 49 | 2019 |
| ARGminer: a web platform for the crowdsourcing-based curation of antibiotic resistance genes GA Arango-Argoty, GKP Guron, E Garner, MV Riquelme, LS Heath, ... Bioinformatics 36 (9), 2966-2973, 2020 | 47 | 2020 |
| Effects of sample preservation and DNA extraction on enumeration of antibiotic resistance genes in wastewater AD Li, JW Metch, Y Wang, E Garner, AN Zhang, MV Riquelme, ... FEMS microbiology ecology 94 (2), fix189, 2018 | 46 | 2018 |
| Combined effects of composting and antibiotic administration on cattle manure–borne antibiotic resistance genes I Keenum, RK Williams, P Ray, ED Garner, KF Knowlton, A Pruden Microbiome 9, 1-16, 2021 | 44 | 2021 |
| Demonstrating a comprehensive wastewater-based surveillance approach that differentiates globally sourced resistomes MV Prieto Riquelme, E Garner, S Gupta, J Metch, N Zhu, MF Blair, ... Environmental Science & Technology 56 (21), 14982-14993, 2022 | 40* | 2022 |
Amy PrudenProfessor of Environmental Engineering, Virginia TechVerified email at vt.edu
