| MedlineRanker: flexible ranking of biomedical literature JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ... Nucleic acids research 37 (suppl_2), W141-W146, 2009 | 95 | 2009 |
| Moving pieces in a taxonomic puzzle: venom 2D-LC/MS and data clustering analyses to infer phylogenetic relationships in some scorpions from the Buthidae family (Scorpiones) DG Nascimento, B Rates, DM Santos, T Verano-Braga, A Barbosa-Silva, ... Toxicon 47 (6), 628-639, 2006 | 80 | 2006 |
| Genie: literature-based gene prioritization at multi genomic scale JF Fontaine, F Priller, A Barbosa-Silva, MA Andrade-Navarro Nucleic acids research 39 (suppl_2), W455-W461, 2011 | 67 | 2011 |
| uORFdb—a comprehensive literature database on eukaryotic uORF biology K Wethmar, A Barbosa-Silva, MA Andrade-Navarro, A Leutz Nucleic acids research 42 (D1), D60-D67, 2014 | 64 | 2014 |
| PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries A Barbosa-Silva, JF Fontaine, ER Donnard, F Stussi, JM Ortega, ... BMC bioinformatics 12 (1), 435, 2011 | 56 | 2011 |
| A reference guide for tree analysis and visualization GA Pavlopoulos, TG Soldatos, A Barbosa-Silva, R Schneider BioData mining 3 (1), 1, 2010 | 54 | 2010 |
| Laitor-literature assistant for identification of terms co-occurrences and relationships A Barbosa-Silva, TG Soldatos, ILF Magalhães, GA Pavlopoulos, ... BMC bioinformatics 11 (1), 70, 2010 | 39 | 2010 |
| Integration and visualization of translational medicine data for better understanding of human diseases V Satagopam, W Gu, S Eifes, P Gawron, M Ostaszewski, S Gebel, ... Big data 4 (2), 97-108, 2016 | 33 | 2016 |
| Abundance and diversity of resistance genes in the sugarcane transcriptome revealed by in silico analysis. AC Wanderley-Nogueira, NM Soares-Cavalcanti, DAL Morais, ... Genetics and molecular research: GMR 6 (4), 866-89, 2007 | 33 | 2007 |
| Martini: using literature keywords to compare gene sets TG Soldatos, SI O'Donoghue, VP Satagopam, LJ Jensen, NP Brown, ... Nucleic acids research 38 (1), 26-38, 2010 | 27 | 2010 |
| In silico survey of resistance (R) genes in Eucalyptus transcriptome A Barbosa-da-Silva, AC Wanderley-Nogueira, RRM Silva, LC Berlarmino, ... Genetics and Molecular Biology 28 (3), 562-574, 2005 | 24 | 2005 |
| SmartR: an open-source platform for interactive visual analytics for translational research data S Herzinger, W Gu, V Satagopam, S Eifes, K Rege, A Barbosa-Silva, ... Bioinformatics 33 (14), 2229-2231, 2017 | 16 | 2017 |
| Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence A Barbosa-Silva, VP Satagopam, R Schneider, JM Ortega BMC bioinformatics 9 (1), 141, 2008 | 14 | 2008 |
| Preimplantation development regulatory pathway construction through a text-mining approach E Donnard, A Barbosa-Silva, RLM Guedes, GR Fernandes, H Velloso, ... BMC genomics 12 (S4), S3, 2011 | 12 | 2011 |
| Caipirini: using gene sets to rank literature TG Soldatos, SI O'Donoghue, VP Satagopam, A Barbosa-Silva, ... BioData mining 5 (1), 1, 2012 | 11 | 2012 |
| A procedure to recruit members to enlarge protein family databases--the building of UECOG (UniRef-Enriched COG Database) as a model. GR Fernandes, A Barbosa Da Silva, F Prosdocimi, IA Pena, ... Genetics and molecular research: GMR 7 (3), 910-24, 2008 | 10 | 2008 |
| A guide for building biological pathways along with two case studies: hair and breast development D Trindade, LA Orsine, A Barbosa-Silva, ER Donnard, JM Ortega Methods 74, 16-35, 2015 | 4 | 2015 |
| In Silico Screening for Pathogenesis Related-2 Gene Candidates in VignaUnguiculata Transcriptome AC Wanderley-Nogueira, N da Mota Soares-Cavalcanti, LC Belarmino, ... International Meeting on Computational Intelligence Methods for …, 2009 | 4 | 2009 |
| Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae LCC Brusamarello-Santos, D Alberton, G Valdameri, D Camilios-Neto, ... Scientific reports 9 (1), 1-15, 2019 | 2 | 2019 |
| Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium W Gu, R Yildirimman, E Van der Stuyft, D Verbeeck, S Herzinger, ... BMC bioinformatics 20 (1), 1-11, 2019 | 1 | 2019 |
Reinhard SchneiderHead of Bioinformatics Core Facility, Luxembourg Centre for Systems Biomedicine (LCSB), UniversityEmail confirmado em uni.lu
