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Peter D Tonner
Peter D Tonner
Mathematical Statistician, NIST
Verified email at nist.gov
Title
Cited by
Cited by
Year
Detecting differential growth of microbial populations with Gaussian process regression
PD Tonner, CL Darnell, BE Engelhardt, AK Schmid
Genome research 27 (2), 320-333, 2017
642017
Synergistic impacts of organic acids and pH on growth of Pseudomonas aeruginosa: A comparison of parametric and Bayesian non-parametric methods to model growth
FML Bushell, PD Tonner, S Jabbari, AK Schmid, PA Lund
Frontiers in Microbiology 9, 418502, 2019
542019
The genotype‐phenotype landscape of an allosteric protein
DS Tack, PD Tonner, A Pressman, ND Olson, SF Levy, EF Romantseva, ...
Molecular systems biology 17 (3), e10179, 2021
472021
Detecting transcription of ribosomal protein pseudogenes in diverse human tissues from RNA-seq data
P Tonner, V Srinivasasainagendra, S Zhang, D Zhi
BMC genomics 13, 1-10, 2012
422012
Transcriptional regulation in archaea: from individual genes to global regulatory networks
M Martinez-Pastor, PD Tonner, CL Darnell, AK Schmid
Annual review of genetics 51, 143-170, 2017
402017
A regulatory hierarchy controls the dynamic transcriptional response to extreme oxidative stress in archaea
PD Tonner, AMC Pittman, JG Gulli, K Sharma, AK Schmid
PLoS Genetics 11 (1), e1004912, 2015
382015
Geppetto: An environment for the efficient control and transmission of digital puppetry
DP Mapes, P Tonner, CE Hughes
Virtual and Mixed Reality-Systems and Applications: International Conference …, 2011
282011
Systematic discovery of archaeal transcription factor functions in regulatory networks through quantitative phenotyping analysis
CL Darnell, PD Tonner, JG Gulli, SC Schmidler, AK Schmid
MSystems 2 (5), 10.1128/msystems. 00032-17, 2017
262017
Predicted coronavirus Nsp5 protease cleavage sites in the human proteome
BM Scott, V Lacasse, DG Blom, PD Tonner, NS Blom
BMC Genomic Data 23 (1), 25, 2022
202022
A transcription network of interlocking positive feedback loops maintains intracellular iron balance in archaea
M Martinez-Pastor, WA Lancaster, PD Tonner, MWW Adams, AK Schmid
Nucleic Acids Research 45 (17), 9990-10001, 2017
192017
Interpretable modeling of genotype–phenotype landscapes with state-of-the-art predictive power
PD Tonner, A Pressman, D Ross
Proceedings of the National Academy of Sciences 119 (26), e2114021119, 2022
162022
A Bayesian non-parametric mixed-effects model of microbial growth curves
PD Tonner, CL Darnell, FML Bushell, PA Lund, AK Schmid, SC Schmidler
PLOS Computational Biology 16 (10), e1008366, 2020
122020
Application of bayesian optimization and regression analysis to ferromagnetic materials development
AR Will-Cole, AG Kusne, P Tonner, C Dong, X Liang, H Chen, NX Sun
IEEE Transactions on Magnetics 58 (1), 1-8, 2021
72021
Interpretable modeling of genotype-phenotype landscapes with state-of-the-art predictive power
PD Tonner, A Pressman, D Ross
bioRxiv, 2021.06. 11.448129, 2021
62021
Systematic discovery of archaeal transcription factor functions in regulatory networks through quantitative phenotyping analysis. mSystems 2: e00032-17
CL Darnell, PD Tonner, JG Gulli, SC Schmidler, AK Schmid
Web of Science, 2017
52017
Method for reproducible automated bacterial cell culture and measurement
D Ross, PD Tonner, OB Vasilyeva
Synthetic Biology 7 (1), ysac013, 2022
42022
Predicted Coronavirus Nsp5 Protease Cleavage Sites in the Human Proteome: A Resource for SARS-CoV-2 Research
BM Scott, V Lacasse, DG Blom, PD Tonner, NS Blom
bioRxiv, 2021.06. 08.447224, 2021
32021
Precision engineering of biological function with large-scale measurements and machine learning
DS Tack, PD Tonner, A Pressman, ND Olson, SF Levy, EF Romantseva, ...
PloS one 18 (3), e0283548, 2023
12023
StratoMod: Predicting sequencing and variant calling errors with interpretable machine learning
N Dwarshuis, P Tonner, ND Olson, FJ Sedlazeck, J Wagner, JM Zook
bioRxiv, 2023.01. 20.524401, 2023
12023
Measurements drive progress in directed evolution for precise engineering of biological systems
DS Tack, EF Romantseva, PD Tonner, A Pressman, J Rammohan, ...
Current opinion in systems biology 23, 32-37, 2020
12020
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