| The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters K Blin, V Pascal Andreu, ELC de los Santos, F Del Carratore, SY Lee, ... Nucleic acids research 47 (D1), D625-D630, 2019 | 167 | 2019 |
| RankProd 2.0: a refactored bioconductor package for detecting differentially expressed features in molecular profiling datasets F Del Carratore, A Jankevics, R Eisinga, T Heskes, F Hong, R Breitling Bioinformatics 33 (17), 2774-2775, 2017 | 119 | 2017 |
| 1H-NMR analysis provides a metabolomic profile of patients with multiple sclerosis E Cocco, F Murgia, L Lorefice, L Barberini, S Poddighe, J Frau, G Fenu, ... Neuroimmunology & Neuroinflammation 3 (1), e185, 2015 | 69 | 2015 |
| Metabolomics as a tool for the characterization of drug-resistant epilepsy F Murgia, A Muroni, M Puligheddu, L Polizzi, L Barberini, G Orofino, ... Frontiers in neurology 8, 274978, 2017 | 45* | 2017 |
| Dynamics of the human skin mediator lipidome in response to dietary ω-3 fatty acid supplementation AC Kendall, SM Pilkington, SA Murphy, F Del Carratore, AL Sunarwidhi, ... The FASEB Journal 33 (11), 13014, 2019 | 32 | 2019 |
| Computational identification of co-evolving multi-gene modules in microbial biosynthetic gene clusters F Del Carratore, K Zych, M Cummings, E Takano, MH Medema, ... Communications biology 2 (1), 83, 2019 | 28 | 2019 |
| 1H NMR spectroscopy-based metabolomics analysis for the diagnosis of symptomatic E. coli-associated urinary tract infection (UTI) M Lussu, T Camboni, C Piras, C Serra, F Del Carratore, J Griffin, L Atzori, ... BMC microbiology 17, 1-8, 2017 | 28 | 2017 |
| Translation stress positively regulates MscL-dependent excretion of cytoplasmic proteins R Morra, F Del Carratore, H Muhamadali, LG Horga, S Halliwell, ... MBio 9 (1), 10.1128/mbio. 02118-17, 2018 | 24 | 2018 |
| Integrated probabilistic annotation: a bayesian-based annotation method for metabolomic profiles integrating biochemical connections, isotope patterns, and adduct relationships F Del Carratore, K Schmidt, M Vinaixa, KA Hollywood, C Greenland-Bews, ... Analytical chemistry 91 (20), 12799-12807, 2019 | 20 | 2019 |
| Biotechnological application of Streptomyces for the production of clinical drugs and other bioactive molecules F Del Carratore, EKR Hanko, R Breitling, E Takano Current Opinion in Biotechnology 77, 102762, 2022 | 15 | 2022 |
| Multi-Omics Analysis of the Effect of cAMP on Actinorhodin Production in Streptomyces coelicolor K Nitta, FD Carratore, R Breitling, E Takano, SP Putri, E Fukusaki Frontiers in Bioengineering and Biotechnology 8, 595552, 2020 | 8 | 2020 |
| Statistical health monitoring applied to a metabolomic study of experimental hepatocarcinogenesis: An alternative approach to supervised methods for the identification of false … F Del Carratore, M Lussu, MA Kowalik, A Perra, JL Griffin, L Atzori, ... Analytical chemistry 88 (16), 7921-7929, 2016 | 7 | 2016 |
| Reference-grade genome and large linear plasmid of Streptomyces rimosus: pushing the limits of Nanopore sequencing L Slemc, J Jakše, A Filisetti, D Baranasic, A Rodríguez-García, ... Microbiology spectrum 10 (2), e02434-21, 2022 | 6 | 2022 |
| Multi-omics study of Planobispora rosea, producer of the thiopeptide antibiotic GE2270A F Del Carratore, M Iorio, M Pérez-Bonilla, K Schmidt, R Pérez-Redondo, ... Msystems 6 (3), 10.1128/msystems. 00341-21, 2021 | 3 | 2021 |
| Synthetic biology approaches to actinomycete strain improvement R Breitling, M Avbelj, O Bilyk, FD Carratore, A Filisetti, EKR Hanko, M Iorio, ... FEMS microbiology letters 368 (10), fnab060, 2021 | 2 | 2021 |
| Output ordering and prioritisation system (OOPS): ranking biosynthetic gene clusters to enhance bioactive metabolite discovery A Peña, F Del Carratore, M Cummings, E Takano, R Breitling Journal of Industrial Microbiology and Biotechnology 45 (7), 615-619, 2018 | 1 | 2018 |
| ipaPy2: Integrated Probabilistic Annotation (IPA) 2.0—an improved Bayesian-based method for the annotation of LC–MS/MS untargeted metabolomics data F Del Carratore, W Eagles, J Borka, R Breitling Bioinformatics 39 (7), btad455, 2023 | | 2023 |
| Method for the in vitro identification of drug-resistant epilepsy L Atzori, F Murgia, F Marrosu, F Del Carratore US Patent 10,697,978, 2020 | | 2020 |
| From genomes to metabolomes: computational methods for systems and synthetic biology F Del Carratore PQDT-UK & Ireland, 2018 | | 2018 |
