| Transposable elements in the mammalian embryo: pioneers surviving through stealth and service P Gerdes, SR Richardson, DL Mager, GJ Faulkner Genome biology 17, 1-17, 2016 | 173 | 2016 |
| Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells S Klawitter, NV Fuchs, KR Upton, M Munoz-Lopez, R Shukla, J Wang, ... Nature communications 7 (1), 10286, 2016 | 144 | 2016 |
| LINE-1 evasion of epigenetic repression in humans FJ Sanchez-Luque, MJHC Kempen, P Gerdes, DB Vargas-Landin, ... Molecular cell 75 (3), 590-604. e12, 2019 | 122 | 2019 |
| Heritable L1 retrotransposition in the mouse primordial germline and early embryo SR Richardson, P Gerdes, DJ Gerhardt, FJ Sanchez-Luque, GO Bodea, ... Genome research 27 (8), 1395-1405, 2017 | 107 | 2017 |
| L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis SN Schauer, PE Carreira, R Shukla, DJ Gerhardt, P Gerdes, ... Genome research 28 (5), 639-653, 2018 | 88 | 2018 |
| No evidence of human genome integration of SARS-CoV-2 found by long-read DNA sequencing N Smits, J Rasmussen, GO Bodea, AA Amarilla, P Gerdes, ... Cell reports 36 (7), 2021 | 44 | 2021 |
| Evidence for L1-associated DNA rearrangements and negligible L1 retrotransposition in glioblastoma multiforme PE Carreira, AD Ewing, G Li, SN Schauer, KR Upton, AC Fagg, S Morell, ... Mobile DNA 7, 1-14, 2016 | 41 | 2016 |
| LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification R Garza, DAM Atacho, A Adami, P Gerdes, M Vinod, PH Hsieh, ... Science Advances 9 (44), eadh9543, 2023 | 8 | 2023 |
| TET enzymes: double agents in the transposable element–host genome conflict P Gerdes, SR Richardson, GJ Faulkner Genome Biology 17, 1-4, 2016 | 8 | 2016 |
| Retrotransposon instability dominates the acquired mutation landscape of mouse induced pluripotent stem cells P Gerdes, SM Lim, AD Ewing, MR Larcombe, D Chan, FJ Sanchez-Luque, ... Nature Communications 13 (1), 7470, 2022 | 7 | 2022 |
| Somatic retrotransposition in the developing rhesus macaque brain V Billon, FJ Sanchez-Luque, J Rasmussen, GO Bodea, DJ Gerhardt, ... Genome Research 32 (7), 1298-1314, 2022 | 6 | 2022 |
| No evidence of human genome integration of SARS-CoV-2 found by long-read DNA sequencing. Cell Rep 36: 109530 N Smits, J Rasmussen, GO Bodea, AA Amarilla, P Gerdes, ... | 6 | 2021 |
| Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells. Nat Commun 7: 10286 S Klawitter, NV Fuchs, KR Upton, M Muñoz-Lopez, R Shukla, J Wang, ... | 6 | 2016 |
| Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells. Nat Commun. 2016; 7: 10286 S Klawitter, NV Fuchs, KR Upton, M Muñoz-Lopez, R Shukla, J Wang, ... | 6 | |
| Revisiting the impact of synthetic ORF sequences on engineered LINE-1 retrotransposition SR Richardson, D Chan, P Gerdes, JS Han, JD Boeke, GJ Faulkner bioRxiv, 2022.08. 29.505632, 2022 | 5 | 2022 |
| Locus-resolution analysis of L1 regulation and retrotransposition potential in mouse embryonic development P Gerdes, D Chan, M Lundberg, FJ Sanchez-Luque, GO Bodea, ... Genome Research 33 (9), 1465-1481, 2023 | 4 | 2023 |
| Human genome integration of SARS-CoV-2 contradicted by long-read sequencing N Smits, J Rasmussen, GO Bodea, AA Amarilla, P Gerdes, ... bioRxiv, 2021 | 4 | 2021 |
| Author Correction: Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells S Klawitter, NV Fuchs, KR Upton, M Muñoz-Lopez, R Shukla, J Wang, ... Nature Communications 9, 2018 | 3 | 2018 |
| Mouse L1s fade with age: a methylation-enforced mechanism for attenuation of L1 retrotransposition potential P Gerdes, D Chan, M Lundberg, FJ Sanchez-Luque, GO Bodea, ... bioRxiv, 2022.08. 06.500894, 2022 | 1 | 2022 |
| LINE-1 retrotransposon activation intrinsic to interneuron development GO Bodea, JM Botto, ME Ferreiro, FJ Sanchez-Luque, ... bioRxiv, 2022.03. 20.485017, 2022 | 1 | 2022 |
