| TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction EL Doyle, NJ Booher, DS Standage, DF Voytas, VP Brendel, JK VanDyk, ... Nucleic acids research 40 (W1), W117-W122, 2012 | 678 | 2012 |
| The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 376* | 2015 |
| Genome, transcriptome and methylome sequencing of a primitively eusocial wasp reveal a greatly reduced DNA methylation system in a social insect DS Standage, AJ Berens, KM Glastad, AJ Severin, VP Brendel, AL Toth Molecular ecology 25 (8), 1769-1784, 2016 | 150 | 2016 |
| ParsEval: parallel comparison and analysis of gene structure annotations DS Standage, VP Brendel BMC bioinformatics 13, 1-10, 2012 | 29 | 2012 |
| Kevlar: a mapping-free framework for accurate discovery of de novo variants DS Standage, CT Brown, F Hormozdiari Iscience 18, 28-36, 2019 | 28 | 2019 |
| MicroHapDB: a portable and extensible database of all published microhaplotype marker and frequency data DS Standage, RN Mitchell Frontiers in Genetics 11, 550218, 2020 | 18 | 2020 |
| khmer release v2.1: software for biological sequence analysis DS Standage, MR Crusoe, SEK Joslin, NB Kingsley, KD Murray, ... Journal of Open Source Software, 2017 | 4 | 2017 |
| xGDBvm: A Web GUI-driven workflow for annotating eukaryotic genomes in the cloud J Duvick, DS Standage, N Merchant, VP Brendel The Plant cell 28 (4), 840-854, 2016 | 3 | 2016 |
| mRNAmarkup: quality control and annotation of de novo transcriptome assemblies VP Brendel, DS Standage | 1 | |
| Empirical haplotype calling and probabilistic interpretation of microhaplotype profiles D Standage, R Just, C Scharfe, N Gandotra Forensic Science International: Genetics Supplement Series 8, 265-267, 2022 | | 2022 |
| iLoci: robust evaluation of genome content and organization for provisional and mature genome assemblies DS Standage, T Lai, VP Brendel NAR Genomics and Bioinformatics 4 (1), lqac013, 2022 | | 2022 |
| Taxonomically-restricted genes and the evolution of lineage-specific characteristics DS Standage | | 2013 |
| PhyloProf: A Software Package for Predicting Gene Function Using Phylogenetic Profile Analysis DS Standage Brigham Young University. Department of Biology, 2010 | | 2010 |
| The khmer software package: enabling efficient nucleotide MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | | |
Volker BrendelProfessor of Biology and Computer Science, Indiana UniversityVerified email at indiana.edu
