| Size matters: assessing optimum soil sample size for fungal and bacterial community structure analyses using high throughput sequencing of rRNA gene amplicons CR Penton, VVSR Gupta, J Yu, JM Tiedje Frontiers in Microbiology 7, 202946, 2016 | 75 | 2016 |
| Biochar application influences microbial assemblage complexity and composition due to soil and bioenergy crop type interactions J Yu, LM Deem, SE Crow, JL Deenik, CR Penton Soil Biology and Biochemistry 117, 97-107, 2018 | 73 | 2018 |
| Winter warming in Alaska accelerates lignin decomposition contributed by Proteobacteria X Tao, J Feng, Y Yang, G Wang, R Tian, F Fan, D Ning, CT Bates, L Hale, ... Microbiome 8, 1-12, 2020 | 51 | 2020 |
| Diazotroph diversity and nitrogen fixation in summer active perennial grasses in a Mediterranean region agricultural soil VVSR Gupta, B Zhang, CR Penton, J Yu, JM Tiedje Frontiers in molecular biosciences 6, 115, 2019 | 46 | 2019 |
| Vineyard soil microbiome composition related to rotundone concentration in Australian cool climate ‘peppery’Shiraz grapes VVSR Gupta, RGV Bramley, P Greenfield, J Yu, MJ Herderich Frontiers in microbiology 10, 457027, 2019 | 39 | 2019 |
| MicroNiche: an R package for assessing microbial niche breadth and overlap from amplicon sequencing data DR Finn, J Yu, ZE Ilhan, VMC Fernandes, CR Penton, ... FEMS microbiology ecology 96 (8), fiaa131, 2020 | 29 | 2020 |
| Comparative metagenomics reveals enhanced nutrient cycling potential after 2 years of biochar amendment in a tropical oxisol J Yu, LM Deem, SE Crow, J Deenik, CR Penton Applied and environmental microbiology 85 (11), e02957-18, 2019 | 19 | 2019 |
| DNA-stable isotope probing shotgun metagenomics reveals the resilience of active microbial communities to biochar amendment in oxisol soil J Yu, MJ Pavia, LM Deem, SE Crow, JL Deenik, CR Penton Frontiers in microbiology 11, 587972, 2020 | 14 | 2020 |
| Experimental Evolution of Campylobacter jejuni Leads to Loss of Motility, rpoN (σ54) Deletion and Genome Reduction AA Sher, JP Jerome, JA Bell, J Yu, HY Kim, JE Barrick, LS Mansfield Frontiers in Microbiology 11, 579989, 2020 | 14 | 2020 |
| Soil quality shapes the composition of microbial community stress response and core cell metabolism functional genes D Finn, J Yu, CR Penton Applied Soil Ecology 148, 103483, 2020 | 14 | 2020 |
| Agricultural practices drive biological loads, seasonal patterns and potential pathogens in the aerobiome of a mixed-land-use dryland DR Finn, J Maldonado, F de Martini, J Yu, CR Penton, RS Fontenele, ... Science of the Total Environment 798, 149239, 2021 | 13 | 2021 |
| Characterization of Tropical Agricultural Soil Microbiomes After Biochar Amendment J Yu Arizona State University, 2020 | | 2020 |
| A Resilient Agricultural Soil Microbiome Under Biochar Amendment As Revealed By SIP-Metagenomics CR Penton, J Yu, MJ Pavia, L Deem, SE Crow, JL Deenik ASA, CSSA and SSSA International Annual Meetings (2020)| VIRTUAL, 0 | | |
