| Enhancing computational enzyme design by a maximum entropy strategy WJ Xie, M Asadi, A Warshel Proceedings of the National Academy of Sciences 119 (7), e2122355119, 2022 | 25 | 2022 |
| The geometry of Niggli reduction: SAUC–search of alternative unit cells KJ McGill, M Asadi, MT Karakasheva, LC Andrews, HJ Bernstein Journal of Applied Crystallography 47 (1), 360-364, 2014 | 24 | 2014 |
| Exploring the catalytic reaction of cysteine proteases G Oanca, M Asadi, A Saha, B Ramachandran, A Warshel The Journal of Physical Chemistry B 124 (50), 11349-11356, 2020 | 23 | 2020 |
| The catalytic dwell in ATPases is not crucial for movement against applied torque C Bai, M Asadi, A Warshel Nature Chemistry 12 (12), 1187-1192, 2020 | 12 | 2020 |
| Effect of environmental factors on the catalytic activity of intramembrane serine protease M Asadi, G Oanca, A Warshel Journal of the American Chemical Society 144 (3), 1251-1257, 2022 | 7 | 2022 |
| Analyzing the Reaction of Orotidine 5′-Phosphate Decarboxylase as a Way to Examine Some Key Catalytic Proposals M Asadi, A Warshel Journal of the American Chemical Society 145 (2), 1334-1341, 2022 | 6 | 2022 |
| The Geometry of Niggli Reduction III: SAUC--Search of Alternate Unit Cells KJ McGill, M Asadi, MT Karakasheva, LC Andrews, HJ Bernstein arXiv preprint arXiv:1307.1811, 2013 | 2 | 2013 |
| Exploring the role of chemical reactions in the selectivity of tyrosine kinase inhibitors M Asadi, WJ Xie, A Warshel Journal of the American Chemical Society 144 (36), 16638-16646, 2022 | 1 | 2022 |
| Computational Mechanistic Insights into Reversible and Irreversible Covalent Inhibitors Targeting SARS-CoV-2 Mpro M Asadi, A Nandi, A Warshel | | 2024 |
| Intramembrane serine protease catalysis in different physical environments M Asadi Biophysical Journal 121 (3), 450a, 2022 | | 2022 |
| Monte Carlo simulation of pH activated conformational changes of coarse-grained sodium-proton antiporters M Asadi, A Warshel Bulletin of the American Physical Society 65, 2020 | | 2020 |
| Supplementary Information Exploring the role of chemical reactions in the selectivity of tyrosine kinase inhibitors M Asadi, WJ Xie, A Warshel | | |
| Computational Methods and Computational Studies 1.1 The Empirical Valence Bond (EVB) Method M Asadi, G Oanca, A Warshel | | |
