Follow
Chuan Dong
Title
Cited by
Cited by
Year
Anti-CRISPRdb: a comprehensive online resource for anti-CRISPR proteins
C Dong, GF Hao, HL Hua, S Liu, AA Labena, G Chai, J Huang, N Rao, ...
Nucleic acids research 46 (D1), D393-D398, 2018
762018
Accurate prediction of human essential genes using only nucleotide composition and association information
FB Guo, C Dong, HL Hua, S Liu, H Luo, HW Zhang, YT Jin, KY Zhang
Bioinformatics 33 (12), 1758-1764, 2017
602017
Vgas: a viral genome annotation system
KY Zhang, YZ Gao, MZ Du, S Liu, C Dong, FB Guo
Frontiers in microbiology 10, 184, 2019
512019
Comprehensive review of the identification of essential genes using computational methods: focusing on feature implementation and assessment
C Dong, YT Jin, HL Hua, QF Wen, S Luo, WX Zheng, FB Guo
Briefings in bioinformatics 21 (1), 171-181, 2020
382020
Geptop 2.0: an updated, more precise, and faster Geptop server for identification of prokaryotic essential genes
QF Wen, C Dong, S Liu, YZ Gao, HX Guo, FB Guo
Frontiers in Microbiology 10, 1236, 2019
352019
An approach for predicting essential genes using multiple homology mapping and machine learning algorithms
HL Hua, FZ Zhang, AA Labena, C Dong, YT Jin, FB Guo
BioMed research international 2016, 2016
242016
Combining pseudo dinucleotide composition with the Z curve method to improve the accuracy of predicting DNA elements: a case study in recombination spots
C Dong, YZ Yuan, FZ Zhang, HL Hua, YN Ye, AA Labena, H Lin, W Chen, ...
Molecular BioSystems 12 (9), 2893-2900, 2016
212016
Species-specific partial gene duplication in Arabidopsis thaliana evolved novel phenotypic effects on morphological traits under strong positive selection
Y Huang, J Chen, C Dong, D Sosa, S Xia, Y Ouyang, C Fan, D Li, ...
The Plant Cell 34 (2), 802-817, 2022
172022
Identification and analysis of genomic islands in Burkholderia cenocepacia AU 1054 with emphasis on pathogenicity islands
FB Guo, L Xiong, KY Zhang, C Dong, FZ Zhang, PCY Woo
BMC microbiology 17, 1-10, 2017
172017
Anti-CRISPRdb v2. 2: an online repository of anti-CRISPR proteins including information on inhibitory mechanisms, activities and neighbors of curated anti-CRISPR proteins
C Dong, X Wang, C Ma, Z Zeng, DK Pu, S Liu, CS Wu, S Chen, Z Deng, ...
Database 2022, baac010, 2022
152022
Metabolic pathway databases and model repositories
AA Labena, YZ Gao, C Dong, H Hua, FB Guo
Quantitative Biology 6 (1), 30-39, 2018
132018
IMGMD: A platform for the integration and standardisation of In silico Microbial Genome-scale Metabolic Models
C Ye, N Xu, C Dong, Y Ye, X Zou, X Chen, F Guo, L Liu
Scientific Reports 7 (1), 727, 2017
122017
A novel proposal of a simplified bacterial gene set and the neo-construction of a general minimized metabolic network
YN Ye, BG Ma, C Dong, H Zhang, LL Chen, FB Guo
Scientific Reports 6 (1), 35082, 2016
102016
Precise detection of Acrs in prokaryotes using only six features
C Dong, DK Pu, C Ma, X Wang, QF Wen, Z Zeng, FB Guo
bioRxiv, 2020.05. 23.112011, 2020
52020
CasLocusAnno: a web‐based server for annotating cas loci and their corresponding (sub)types
C Dong, Z Zeng, DK Pu, QF Wen, S Liu, MZ Du, Y Sun, YZ Gao, N Rao, ...
FEBS letters 593 (18), 2646-2654, 2019
52019
Insights into azalomycin F assembly-line contribute to evolution-guided polyketide synthase engineering and identification of intermodular recognition
G Zhai, Y Zhu, G Sun, F Zhou, Y Sun, Z Hong, C Dong, PF Leadlay, ...
Nature Communications 14 (1), 612, 2023
42023
Comprehensive exploration of the enzymes catalysing oxygen‐involved reactions and COGs relevant to bacterial oxygen utilization
S Liu, MZ Du, QF Wen, J Kang, C Dong, L Xiong, J Huang, FB Guo
Environmental microbiology 20 (10), 3836-3850, 2018
32018
SSER: Species specific essential reactions database
AA Labena, YN Ye, C Dong, FZ Zhang, FB Guo
BMC Systems Biology 11, 1-8, 2017
32017
Prediction of protein-coding small ORFs in multi-species using integrated sequence-derived features and the random forest model
J Yu, W Jiang, SB Zhu, Z Liao, X Dou, J Liu, FB Guo, C Dong
Methods 210, 10-19, 2023
22023
Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection
J Chen, P Landback, D Arsala, A Guzzetta, S Xia, J Atlas, C Dong, D Sosa, ...
biorxiv, 2023
12023
The system can't perform the operation now. Try again later.
Articles 1–20