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Haodong Xu
Haodong Xu
Assistant Professor of Health Informatics NTR, University of Texas Health Science Center at Houston
在 hust.edu.cn 的电子邮件经过验证
标题
引用次数
引用次数
年份
GPS 5.0: an update on the prediction of kinase-specific phosphorylation sites in proteins
C Wang, H Xu, S Lin, W Deng, J Zhou, Y Zhang, Y Shi, D Peng, Y Xue
Genomics, Proteomics and Bioinformatics 18 (1), 72-80, 2020
2432020
PLMD: an updated data resource of protein lysine modifications
H Xu, J Zhou, S Lin, W Deng, Y Zhang, Y Xue
Journal of Genetics and Genomics 44 (5), 243-250, 2017
1972017
PTMD: a database of human disease-associated post-translational modifications
H Xu, Y Wang, S Lin, W Deng, D Peng, Q Cui, Y Xue
Genomics, Proteomics and Bioinformatics 16 (4), 244-251, 2018
1742018
Database resources of the BIG data center in 2018
Nucleic Acids Research 46 (D1), D14-D20, 2018
1052018
Database resources of the BIG data center in 2019
BIGDC Members
Nucleic acids research 47 (Database issue), D8, 2019
932019
Accurate in silico prediction of species-specific methylation sites based on information gain feature optimization
PP Wen, SP Shi, HD Xu, LN Wang, JD Qiu
Bioinformatics 32 (20), 3107-3115, 2016
822016
SuccFind: a novel succinylation sites online prediction tool via enhanced characteristic strategy
HD Xu, SP Shi, PP Wen, JD Qiu
Bioinformatics 31 (23), 3748-3750, 2015
642015
Deep4mC: systematic assessment and computational prediction for DNA N4-methylcytosine sites by deep learning
H Xu, P Jia, Z Zhao
Briefings in bioinformatics 22 (3), bbaa099, 2021
592021
Computational prediction of species-specific malonylation sites via enhanced characteristic strategy
LN Wang, SP Shi, HD Xu, PP Wen, JD Qiu
Bioinformatics 33 (10), 1457-1463, 2017
572017
KinaseMD: kinase mutations and drug response database
R Hu, H Xu, P Jia, Z Zhao
Nucleic Acids Research 49 (D1), D552-D561, 2021
472021
6mA-Finder: a novel online tool for predicting DNA N6-methyladenine sites in genomes
H Xu, R Hu, P Jia, Z Zhao
Bioinformatics 36 (10), 3257-3259, 2020
372020
Predicting lysine‐malonylation sites of proteins using sequence and predicted structural features
G Taherzadeh, Y Yang, H Xu, Y Xue, AWC Liew, Y Zhou
Journal of computational chemistry 39 (22), 1757-1763, 2018
342018
HybridSucc: a hybrid-learning architecture for general and species-specific succinylation site prediction
W Ning, H Xu, P Jiang, H Cheng, W Deng, Y Guo, Y Xue
Genomics, Proteomics and Bioinformatics 18 (2), 194-207, 2020
302020
Integrated omics in Drosophila uncover a circadian kinome
C Wang, K Shui, S Ma, S Lin, Y Zhang, B Wen, W Deng, H Xu, H Hu, ...
Nature Communications 11 (1), 2710, 2020
272020
Proteomic analysis and prediction of human phosphorylation sites in subcellular level reveal subcellular specificity
X Chen, SP Shi, SB Suo, HD Xu, JD Qiu
Bioinformatics 31 (2), 194-200, 2015
262015
iEKPD 2.0: an update with rich annotations for eukaryotic protein kinases, protein phosphatases and proteins containing phosphoprotein-binding domains
Y Guo, D Peng, J Zhou, S Lin, C Wang, W Ning, H Xu, W Deng, Y Xue
Nucleic Acids Research 47 (D1), D344-D350, 2019
252019
PredHydroxy: computational prediction of protein hydroxylation site locations based on the primary structure
SP Shi, X Chen, HD Xu, JD Qiu
Molecular BioSystems 11 (3), 819-825, 2015
252015
DeepPhagy: a deep learning framework for quantitatively measuring autophagy activity in Saccharomyces cerevisiae
Y Zhang, Y Xie, W Liu, W Deng, D Peng, C Wang, H Xu, C Ruan, Y Deng, ...
Autophagy 16 (4), 626-640, 2020
192020
Progress and challenges in predicting protein methylation sites
SP Shi, HD Xu, PP Wen, JD Qiu
Molecular BioSystems 11 (10), 2610-2619, 2015
162015
Systematic analysis of the genetic variability that impacts SUMO conjugation and their involvement in human diseases
HD Xu, SP Shi, X Chen, JD Qiu
Scientific reports 5 (1), 10900, 2015
122015
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