| Deep learning methods in protein structure prediction M Torrisi, G Pollastri, Q Le Computational and Structural Biotechnology Journal 18, 1301-1310, 2020 | 252 | 2020 |
| Deeper profiles and cascaded recurrent and convolutional neural networks for state-of-the-art protein secondary structure prediction M Torrisi, M Kaleel, G Pollastri Scientific reports 9 (1), 12374, 2019 | 79 | 2019 |
| Porter 5: state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes M Torrisi, M Kaleel, G Pollastri BioRxiv, 289033, 2018 | 46* | 2018 |
| PaleAle 5.0: prediction of protein relative solvent accessibility by deep learning M Kaleel, M Torrisi, C Mooney, G Pollastri Amino acids 51, 1289-1296, 2019 | 28 | 2019 |
| Protein structure annotations M Torrisi, G Pollastri Essentials of Bioinformatics, Volume I: Understanding Bioinformatics: Genes …, 2019 | 11* | 2019 |
| Protein profiles: Biases and protocols G Urban, M Torrisi, CN Magnan, G Pollastri, P Baldi Computational and structural biotechnology journal 18, 2281-2289, 2020 | 10 | 2020 |
| Brewery: deep learning and deeper profiles for the prediction of 1D protein structure annotations M Torrisi, G Pollastri Bioinformatics 36 (12), 3897-3898, 2020 | 7* | 2020 |
| Improving the assessment of deep learning models in the context of drug-target interaction prediction M Torrisi, AV de León, G Climent, R Loos, A Panjkovich ICLR2022 Machine Learning for Drug Discovery, 2022 | 1 | 2022 |
| Do chemical language models provide a better compound representation? M Torrisi, S Asadollahi, A de la Vega de León, K Wang, W Copeland bioRxiv, 2023.11. 07.566025, 2023 | | 2023 |
| Drug representation and scrambling experiments highlight issues with training and evaluation of drug-target interaction predictive models de la Vega de Leon Antonio, M Torrisi, A Panjkovich American Chemical Society SciMeetings 3 (2), 2022 | | 2022 |
| Predicting Protein Structural Annotations by Deep and Shallow Learning M Torrisi University College Dublin. School of Computer Science, 2020 | | 2020 |
Gianluca PollastriAssociate Professor, University College DublinVerified email at ucd.ie
