Comprehensive generation, visualization, and reporting of quality control metrics for single-cell RNA sequencing data R Hong, Y Koga, S Bandyadka, A Leshchyk, Y Wang, V Akavoor, X Cao, ... Nature communications 13 (1), 1688, 2022 | 28 | 2022 |
ExperimentSubset: An R package to manage subsets of Bioconductor Experiment objects I Sarfraz, M Asif, J D Campbell Bioinformatics, 2021 | 4 | 2021 |
Giotto Suite: a multi-scale and technology-agnostic spatial multi-omics analysis ecosystem JG Chen, JC Chávez-Fuentes, M O’Brien, J Xu, E Ruiz, W Wang, I Amin, ... bioRxiv, 2023 | 2 | 2023 |
Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data Y Wang, I Sarfraz, WK Teh, A Sokolov, BR Herb, HH Creasy, I Virshup, ... bioRxiv, 2023 | 2 | 2023 |
Interactive analysis of single-cell data using flexible workflows with SCTK2 Y Wang, I Sarfraz, N Pervaiz, R Hong, Y Koga, V Akavoor, X Cao, ... Patterns 4 (8), 2023 | 1 | 2023 |
MiCA: An extended tool for microarray gene expression analysis I Sarfraz, M Asif, K Hijazi Computers in Biology and Medicine 116, 103561, 2020 | | 2020 |