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Manjie Xing
Manjie Xing
Genome Institute of Singapore
Verified email at gis.a-star.edu.sg
Title
Cited by
Cited by
Year
Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor
X Xu, Y Hou, X Yin, L Bao, A Tang, L Song, F Li, S Tsang, K Wu, H Wu, ...
Cell 148 (5), 886-895, 2012
7262012
Genomic and epigenomic profiling of high-risk intestinal metaplasia reveals molecular determinants of progression to gastric cancer
KK Huang, K Ramnarayanan, F Zhu, S Srivastava, C Xu, ALK Tan, M Lee, ...
Cancer cell 33 (1), 137-150. e5, 2018
1882018
Mutation hotspots at CTCF binding sites coupled to chromosomal instability in gastrointestinal cancers
YA Guo, MM Chang, W Huang, WF Ooi, M Xing, P Tan, AJ Skanderup
Nature communications 9 (1), 1520, 2018
1482018
VHL Deficiency Drives Enhancer Activation of Oncogenes in Clear Cell Renal Cell Carcinoma
X Yao, J Tan, KJ Lim, J Koh, WF Ooi, Z Li, D Huang, M Xing, YS Chan, ...
Cancer discovery 7 (11), 1284-1305, 2017
1312017
Epigenomic profiling of primary gastric adenocarcinoma reveals super-enhancer heterogeneity
WF Ooi, M Xing, C Xu, X Yao, MK Ramlee, MC Lim, F Cao, K Lim, D Babu, ...
Nature communications 7 (1), 12983, 2016
1292016
Nanoscale chromatin profiling of gastric adenocarcinoma reveals cancer-associated cryptic promoters and somatically acquired regulatory elements
M Muratani, N Deng, WF Ooi, SJ Lin, M Xing, C Xu, A Qamra, ST Tay, ...
Nature communications 5 (1), 4361, 2014
822014
Cross-species chromatin interactions drive transcriptional rewiring in Epstein–Barr virus–positive gastric adenocarcinoma
A Okabe, KK Huang, K Matsusaka, M Fukuyo, M Xing, X Ong, T Hoshii, ...
Nature Genetics 52 (9), 919-930, 2020
702020
Epigenomic promoter alterations amplify gene isoform and immunogenic diversity in gastric adenocarcinoma
A Qamra, M Xing, N Padmanabhan, JJT Kwok, S Zhang, C Xu, YS Leong, ...
Cancer discovery 7 (6), 630-651, 2017
502017
HoxC5 and miR-615-3p target newly evolved genomic regions to repress hTERT and inhibit tumorigenesis
TD Yan, WF Ooi, A Qamra, A Cheung, DL Ma, GM Sundaram, C Xu, ...
Nature communications 9 (1), 100, 2018
482018
Integrated paired-end enhancer profiling and whole-genome sequencing reveals recurrent CCNE1 and IGF2 enhancer hijacking in primary gastric adenocarcinoma
WF Ooi, AM Nargund, KJ Lim, S Zhang, M Xing, A Mandoli, JQ Lim, ...
Gut 69 (6), 1039-1052, 2020
462020
HNF4α pathway mapping identifies wild-type IDH1 as a targetable metabolic node in gastric cancer
C Xu, WF Ooi, A Qamra, J Tan, BYJ Chua, SWT Ho, K Das, ZFA Isa, Z Li, ...
Gut 69 (2), 231-242, 2020
332020
Epigenetic promoter alterations in GI tumour immune-editing and resistance to immune checkpoint inhibition
R Sundar, KK Huang, V Kumar, K Ramnarayanan, D Demircioglu, Z Her, ...
Gut 71 (7), 1277-1288, 2022
252022
Genomic and epigenomic EBF1 alterations modulate TERT expression in gastric cancer
M Xing, WF Ooi, J Tan, A Qamra, PH Lee, Z Li, C Xu, N Padmanabhan, ...
The Journal of clinical investigation 130 (6), 3005-3020, 2020
152020
Epigenomic promoter alterations amplify gene isoform and immunogenic diversity in gastric adenocarcinoma. Cancer Discov. 2017; 7: 630–651. doi: 10.1158/2159-8290
A Qamra, M Xing, N Padmanabhan, JJT Kwok, S Zhang, C Xu, YS Leong, ...
CD-16-1022.[Abstract][CrossRef][Google Scholar], 0
15
Highly recurrent CBS epimutations in gastric cancer CpG island methylator phenotypes and inflammation
N Padmanabhan, HK Kyon, A Boot, K Lim, S Srivastava, S Chen, Z Wu, ...
Genome biology 22, 1-29, 2021
142021
VHL deficiency drives enhancer activation of oncogenes in clear cell renal cell carcinoma. Cancer Discov. 2017; 7: 1284–1305. doi: 10.1158/2159-8290
X Yao, J Tan, KJ Lim, J Koh, WF Ooi, Z Li, D Huang, M Xing, YS Chan, ...
CD-17-0375.[Abstract][CrossRef][Google Scholar], 0
14
Regulatory enhancer profiling of mesenchymal-type gastric cancer reveals subtype-specific epigenomic landscapes and targetable vulnerabilities
SWT Ho, T Sheng, M Xing, WF Ooi, C Xu, R Sundar, KK Huang, Z Li, ...
Gut 72 (2), 226-241, 2023
132023
Chromatin rewiring by mismatch repair protein MSH2 alters cell adhesion pathways and sensitivity to BET inhibition in gastric cancer
AM Nargund, C Xu, A Mandoli, A Okabe, GB Chen, KK Huang, T Sheng, ...
Cancer Research 82 (14), 2538-2551, 2022
82022
Integrative epigenomic and high-throughput functional enhancer profiling reveals determinants of enhancer heterogeneity in gastric cancer
T Sheng, SWT Ho, WF Ooi, C Xu, M Xing, N Padmanabhan, KK Huang, ...
Genome medicine 13, 1-25, 2021
82021
Epigenomic consequences of coding and noncoding driver mutations
X Yao, M Xing, WF Ooi, P Tan, BT Teh
Trends in Cancer 2 (10), 585-605, 2016
82016
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