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Evan Seitz
Evan Seitz
Computational Postdoctoral Fellow at Cold Spring Harbor Laboratory
Verified email at columbia.edu - Homepage
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Year
A glycan gate controls opening of the SARS-CoV-2 spike protein
T Sztain, SH Ahn, AT Bogetti, L Casalino, JA Goldsmith, E Seitz, ...
Nature Chemistry 13 (10), 963-968, 2021
2772021
POLARIS: Path of least action analysis on energy landscapes
E Seitz, J Frank
Journal of chemical information and modeling 60 (5), 2581-2590, 2020
152020
Recovery of conformational continuum from single-particle Cryo-EM images: Optimization of ManifoldEM informed by ground truth
E Seitz, F Acosta-Reyes, S Maji, P Schwander, J Frank
IEEE transactions on computational imaging 8, 462-478, 2022
122022
A glycan gate controls opening of the SARS-CoV-2 spike protein. Nat Chem 13: 963–968
T Sztain, SH Ahn, AT Bogetti, L Casalino, JA Goldsmith, E Seitz, ...
102021
Simulation of cryo-EM ensembles from atomic models of molecules exhibiting continuous conformations
E Seitz, F Acosta-Reyes, P Schwander, J Frank
BioRxiv, 864116, 2019
102019
Geometric machine learning informed by ground truth: Recovery of conformational continuum from single-particle cryo-EM data of biomolecules
E Seitz, F Acosta-Reyes, S Maji, P Schwander, J Frank
BioRxiv, 2021.06. 18.449029, 2021
42021
Beyond ManifoldEM: Geometric relationships between manifold embeddings of a continuum of 3D molecular structures and their 2D projections
E Seitz, J Frank, P Schwander
Digital Discovery 2 (3), 702-717, 2023
12023
Analysis of Conformational Continuum and Free-energy Landscapes from Manifold Embedding of Single-particle Cryo-EM Ensembles of Biomolecules
E Seitz
Columbia University, 2022
12022
241 A Glycan Gate Controls Opening of the SARS-CoV-2 Spike Protein
T Sztain, SH Ahn, AT Bogetti, L Casalino, JA Goldsmith, E Seitz, ...
Novel Developments in Cryo-EM of Biological Molecules: Resolution in Time …, 0
1
Interpreting cis-regulatory mechanisms from genomic deep neural networks using surrogate models
E Seitz, D McCandlish, J Kinney, P Koo
bioRxiv, 2023
2023
A glycan gate controls opening of the SARS-CoV-2 spike protein (preprint)
T Sztain, SH Ahn, A Bogetti, L Casalino, J Goldsmith, E Seitz, R McCool, ...
2021
151 POLARIS: Path of Least Action Analysis on Energy Landscapes
E Seitz, J Frank
Novel Developments in Cryo-EM of Biological Molecules: Resolution in Time …, 0
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