| Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics RG Parra, NP Schafer, LG Radusky, MY Tsai, AB Guzovsky, PG Wolynes, ... Nucleic acids research 44 (W1), W356-W360, 2016 | 190 | 2016 |
| Exploring the aggregation free energy landscape of the amyloid-β protein (1–40) W Zheng, MY Tsai, M Chen, PG Wolynes Proceedings of the National Academy of Sciences 113 (42), 11835-11840, 2016 | 127 | 2016 |
| Comparing the aggregation free energy landscapes of amyloid beta (1–42) and amyloid beta (1–40) W Zheng, MY Tsai, PG Wolynes Journal of the American Chemical Society 139 (46), 16666-16676, 2017 | 102 | 2017 |
| Electrostatics, structure prediction, and the energy landscapes for protein folding and binding MY Tsai, W Zheng, D Balamurugan, NP Schafer, BL Kim, MS Cheung, ... Protein Science 25 (1), 255-269, 2016 | 88 | 2016 |
| Molecular mechanism of facilitated dissociation of Fis protein from DNA MY Tsai, B Zhang, W Zheng, PG Wolynes Journal of the American Chemical Society 138 (41), 13497-13500, 2016 | 52 | 2016 |
| The aggregation free energy landscapes of polyglutamine repeats M Chen, MY Tsai, W Zheng, PG Wolynes Journal of the American Chemical Society 138 (46), 15197-15203, 2016 | 40 | 2016 |
| PAGE4 and conformational switching: Insights from molecular dynamics simulations and implications for prostate cancer X Lin, S Roy, MK Jolly, F Bocci, NP Schafer, MY Tsai, Y Chen, Y He, ... Journal of molecular biology 430 (16), 2422-2438, 2018 | 38 | 2018 |
| AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes S Jin, VG Contessoto, M Chen, NP Schafer, W Lu, X Chen, C Bueno, ... Nucleic acids research 48 (W1), W25-W30, 2020 | 23 | 2020 |
| Structural and dynamical order of a disordered protein: molecular insights into conformational switching of PAGE4 at the systems level X Lin, P Kulkarni, F Bocci, NP Schafer, S Roy, MY Tsai, Y He, Y Chen, ... Biomolecules 9 (2), 77, 2019 | 22 | 2019 |
| Multiple binding configurations of Fis protein pairs on DNA: Facilitated dissociation versus cooperative dissociation MY Tsai, W Zheng, M Chen, PG Wolynes Journal of the American Chemical Society 141 (45), 18113-18126, 2019 | 14 | 2019 |
| Theoretical Study on Structure and Sum-Frequency Generation (SFG) Spectroscopy of Styrene–Graphene Adsorption System CK Lin, CC Shih, Y Niu, MY Tsai, YJ Shiu, C Zhu, M Hayashi, SH Lin The Journal of Physical Chemistry C 117 (4), 1754-1760, 2013 | 14 | 2013 |
| Modeling protein aggregation kinetics: the method of second stochasticization JL Shen, MY Tsai, NP Schafer, PG Wolynes The Journal of Physical Chemistry B 125 (4), 1118-1133, 2021 | 12 | 2021 |
| Molecular dynamics insight into the role of tertiary (foldon) interactions on unfolding in cytochrome c MY Tsai, AN Morozov, KY Chu, SH Lin Chemical Physics Letters 475 (1-3), 111-115, 2009 | 11 | 2009 |
| Nonadditive interactions in protein folding: the Zipper model of cytochrome c AN Morozov, YJ Shiu, CT Liang, MY Tsai, SH Lin Journal of Biological Physics 33 (4), 255-270, 2007 | 9 | 2007 |
| The role of charge density coupled DNA bending in transcription factor sequence binding specificity: a generic mechanism for indirect readout X Chen, MY Tsai, PG Wolynes Journal of the American Chemical Society 144 (4), 1835-1845, 2022 | 8 | 2022 |
| Thermodynamic insight into protein aggregation using a kinetic ising model MY Tsai, JM Yuan, SH Lin Journal of the Chinese Chemical Society 62 (1), 21-25, 2015 | 6 | 2015 |
| Thermodynamics of protein folding using a modified Wako-Saitô-Muñoz-Eaton model MY Tsai, JM Yuan, Y Teranishi, SH Lin Journal of Biological Physics 38 (4), 543-571, 2012 | 6 | 2012 |
| Exploring the folding energy landscapes of heme proteins using a hybrid AWSEM-heme model X Chen, W Lu, MY Tsai, S Jin, PG Wolynes Journal of Biological Physics, 1-17, 2022 | 5 | 2022 |
| Fibril Surface-Dependent Amyloid Precursors Revealed by Coarse-Grained Molecular Dynamics Simulation YW Ma, TY Lin, MY Tsai Frontiers in Molecular Biosciences 8, 719320, 2021 | 4 | 2021 |
| Early-Stage Oligomerization of Prion-like Polypeptides Reveals the Molecular Mechanism of Amyloid-Disrupting Capacity by Proline Residues TY Lin, YW Ma, MY Tsai The Journal of Physical Chemistry B 127 (5), 1074-1088, 2023 | 2 | 2023 |
Peter G. WolynesBullard-Welch Foundation Professor of Science, Professor of Chemistry, Professor of PhysicsVerified email at rice.edu
