| dittoSeq: universal user-friendly single-cell and bulk RNA sequencing visualization toolkit DG Bunis, J Andrews, GK Fragiadakis, TD Burt, M Sirota Bioinformatics 36 (22-23), 5535-5536, 2020 | 101 | 2020 |
| Essential letters in the fungal alphabet: ABC and MFS transporters and their roles in survival and pathogenicity MH Perlin, J Andrews, S San Toh Advances in genetics 85, 201-253, 2014 | 99 | 2014 |
| Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus MH Perlin, J Amselem, E Fontanillas, SS Toh, Z Chen, J Goldberg, ... BMC genomics 16 (1), 1-24, 2015 | 67 | 2015 |
| A type I IFN-dependent DNA damage response regulates the genetic program and inflammasome activation in macrophages AJ Morales, JA Carrero, PJ Hung, AT Tubbs, JM Andrews, BT Edelson, ... Elife 6, e24655, 2017 | 43 | 2017 |
| Novel Cell Adhesion/Migration Pathways Are Predictive Markers of HDAC Inhibitor Resistance in Cutaneous T Cell Lymphoma JM Andrews, JA Schmidt, KR Carson, AC Musiek, N Mehta-Shah, ... EBioMedicine 46, 170-183, 2019 | 34 | 2019 |
| Nuclear-localized human respiratory syncytial virus NS1 protein modulates host gene transcription J Pei, NR Beri, AJ Zou, P Hubel, HK Dorando, V Bergant, RD Andrews, ... Cell Reports 37 (2), 109803, 2021 | 23 | 2021 |
| escape: Easy single cell analysis platform for enrichment N Borcherding, J Andrews Bioconductor version: Release (3.13) 10, B9, 2020 | 23 | 2020 |
| RAG-mediated DNA breaks attenuate PU. 1 activity in early B cells through activation of a SPIC-BCLAF1 complex D Soodgupta, LS White, W Yang, R Johnston, JM Andrews, M Kohyama, ... Cell reports 29 (4), 829-843. e5, 2019 | 22 | 2019 |
| Determining subpopulation methylation profiles from bisulfite sequencing data of heterogeneous samples using DXM J Fong, JR Gardner, JM Andrews, AF Cashen, JE Payton, KQ Weinberger, ... Nucleic Acids Research 49 (16), e93-e93, 2021 | 8 | 2021 |
| Epigenetic dynamics in normal and malignant B cells: die a hero or live to become a villain JM Andrews, JE Payton Current Opinion in Immunology 57, 15-22, 2019 | 6 | 2019 |
| Genotify: Fast, lightweight gene lookup and summarization J Andrews, M El-Alawi, J Payton Journal of open source software 3 (28), 885, 2018 | 6 | 2018 |
| Using SingleR to annotate single-cell RNA-seq data A Lun, JM Andrews, F Dundar, D Bunis dim 19363, 713, 2020 | 4 | 2020 |
| Oncohistones and disrupted development in pediatric-type diffuse high-grade glioma JK Ocasio, KM Budd, JT Roach, JM Andrews, SJ Baker Cancer and Metastasis Reviews, 1-22, 2023 | 2 | 2023 |
| MODL-06. Targeting c-MET in combination with radiation is effective in MET-fusion driven high-grade glioma M Zuckermann, C He, J Andrews, R Sloan-Henry, B Bianski, J Xie, ... Neuro-Oncology 24 (Supplement_1), i169-i169, 2022 | 2 | 2022 |
| Loss of synergistic transcriptional feedback loops drives diverse B-cell cancers JM Andrews, SC Pyfrom, JA Schmidt, OI Koues, RA Kowalewski, ... EBioMedicine 71, 103559, 2021 | 2 | 2021 |
| The role of neurosurgery in advancing pediatric CNS tumor care worldwide JT Roach, RE Baticulon, DA Campos, JM Andrews, I Qaddoumi, FA Boop, ... Brain and Spine, 101748, 2023 | 1 | 2023 |
| The Greatest Healthcare Disparity: Addressing Inequities in the Treatment of Childhood Central Nervous System Tumors in Low-and Middle-Income Countries JT Roach, NA Shlobin, JM Andrews, RE Baticulon, DA Campos, ... Advances and Technical Standards in Neurosurgery: Volume 48, 1-19, 2023 | | 2023 |
| Clonal Evolution of Cutaneous T Cell Lymphoma Revealed at Single Cell Resolution H Dorando, J Andrews, N Borcherding, C Quinn, J Schmidt, J Aluri, ... Blood 140 (Supplement 1), 754-755, 2022 | | 2022 |
| 40. Clonal evolution of Cutaneous T Cell Lymphoma (CTCL) revealed at single cell resolution J Payton, H Dorando, J Andrews, N Borcherding, J Schmidt, C Quinn, ... Cancer Genetics 268, 14, 2022 | | 2022 |
| Epigenetic drivers of Cutaneous T Cell Lymphoma revealed at single cell resolution J Payton, J Andrews, C Quinn, J Schmidt, A Musiek, N Mehta-Shah The Journal of Immunology 204 (1_Supplement), 145.29-145.29, 2020 | | 2020 |
