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Judong Shen
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The support of human genetic evidence for approved drug indications
MR Nelson, H Tipney, JL Painter, J Shen, P Nicoletti, Y Shen, A Floratos, ...
Nature genetics 47 (8), 856-860, 2015
13012015
An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 people
MR Nelson, D Wegmann, MG Ehm, D Kessner, P St. Jean, C Verzilli, ...
Science 337 (6090), 100-104, 2012
7992012
HIBAG—HLA genotype imputation with attribute bagging
X Zheng, J Shen, C Cox, JC Wakefield, MG Ehm, MR Nelson, BS Weir
The pharmacogenomics journal 14 (2), 192-200, 2014
4182014
Multi-population classical HLA type imputation
A Dilthey, S Leslie, L Moutsianas, J Shen, C Cox, MR Nelson, G McVean
PLoS computational biology 9 (2), e1002877, 2013
1982013
Determination of cluster number in clustering microarray data
J Shen, SI Chang, ES Lee, Y Deng, SJ Brown
Applied Mathematics and Computation 169 (2), 1172-1185, 2005
1172005
Comprehensive genome-wide evaluation of lapatinib-induced liver injury yields a single genetic signal centered on known risk allele HLA-DRB1* 07: 01
LR Parham, LP Briley, L Li, J Shen, PJ Newcombe, KS King, AJ Slater, ...
The pharmacogenomics journal 16 (2), 180-185, 2016
632016
Deep Resequencing Unveils Genetic Architecture of ADIPOQ and Identifies a Novel Low-Frequency Variant Strongly Associated With Adiponectin Variation
LL Warren, L Li, MR Nelson, MG Ehm, J Shen, DJ Fraser, JL Aponte, ...
Diabetes 61 (5), 1297-1301, 2012
492012
Multi-trait analysis of rare-variant association summary statistics using MTAR
L Luo, J Shen, H Zhang, A Chhibber, DV Mehrotra, ZZ Tang
Nature Communications 11 (1), 2850, 2020
472020
No evidence of large genetic effects on steroid response in asthma patients
M Mosteller, L Hosking, K Murphy, J Shen, K Song, M Nelson, S Ghosh
Journal of Allergy and Clinical Immunology 139 (3), 797-803. e7, 2017
442017
Deep sequencing of the LRRK2 gene in 14,002 individuals reveals evidence of purifying selection and independent origin of the p.Arg1628Pro mutation in Europe
JP Rubio, S Topp, L Warren, PL St. Jean, D Wegmann, D Kessner, ...
Human mutation 33 (7), 1087-1098, 2012
362012
STOPGAP: a database for systematic target opportunity assessment by genetic association predictions
J Shen, K Song, AJ Slater, E Ferrero, MR Nelson
Bioinformatics 33 (17), 2784-2786, 2017
292017
Effect of Endogenous Clostridioides difficile Toxin Antibodies on Recurrence of C. difficile Infection
CP Kelly, IR Poxton, J Shen, MH Wilcox, DN Gerding, X Zhao, OF Laterza, ...
Clinical infectious diseases 71 (1), 81-86, 2020
252020
Pharmacogenomics polygenic risk score for drug response prediction using PRS-PGx methods
S Zhai, H Zhang, DV Mehrotra, J Shen
Nature Communications 13 (1), 5278, 2022
232022
Germline HLA landscape does not predict efficacy of pembrolizumab monotherapy across solid tumor types
A Chhibber, L Huang, H Zhang, J Xu, R Cristescu, X Liu, DV Mehrotra, ...
Immunity 55 (1), 56-64. e4, 2022
222022
Global Landscape of Clostridioides Difficile Phylogeography, Antibiotic Susceptibility, and Toxin Polymorphisms by Post-Hoc Whole-Genome Sequencing from the …
H Zhao, DC Nickle, Z Zeng, PYT Law, MH Wilcox, L Chen, Y Peng, ...
Infectious Diseases and Therapy 10, 853-870, 2021
212021
Rare variant testing across methods and thresholds using the multi-kernel sequence kernel association test (MK-SKAT)
E Urrutia, S Lee, A Maity, N Zhao, J Shen, Y Li, MC Wu
Statistics and its interface 8 (4), 495, 2015
162015
Support vector fuzzy adaptive network in regression analysis
J Shen, YR Syau, ES Lee
Computers & Mathematics with Applications 54 (11-12), 1353-1366, 2007
162007
Genetic Association Reveals Protection against Recurrence of Clostridium difficile Infection with Bezlotoxumab Treatment
J Shen, DV Mehrotra, MB Dorr, Z Zeng, J Li, X Xu, D Nickle, ER Holzinger, ...
MSphere 5 (3), 10.1128/msphere. 00232-20, 2020
152020
GWAS of longitudinal trajectories at biobank scale
S Ko, CA German, A Jensen, J Shen, A Wang, DV Mehrotra, YV Sun, ...
The American Journal of Human Genetics 109 (3), 433-445, 2022
132022
Modelling and analysis of waviness reduction in soft-pad grinding of wire-sawn silicon wafers by support vector regression
J Shen, ZJ Pei, GR Fisher, ES Lee
International journal of production research 44 (13), 2605-2623, 2006
132006
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Articles 1–20