Prefusion Spike Protein Conformational Changes Are Slower in SARS-CoV-2 than in SARS-CoV-1 M o Govind Kumar, V., Ogden, D. S., Isu, U. H., Polasa, A., Losey, J., & Moradi Journal of Biological Chemistry, 2022 | 21 | 2022 |
Binding affinity estimation from restrained umbrella sampling simulations V Govind Kumar, A Polasa, S Agrawal, TKS Kumar, M Moradi Nature Computational Science 3 (1), 59-70, 2023 | 7 | 2023 |
Differential dynamic behavior of prefusion spike proteins of SARS coronaviruses 1 and 2 VG Kumar, DS Ogden, UH Isu, A Polasa, J Losey, M Moradi BioRxiv, 2020.12. 25.424008, 2020 | 7 | 2020 |
An investigation of the YidC-mediated membrane insertion of Pf3 coat protein using molecular dynamics simulations A Polasa, JJ Hettige, K Immadisetty, M Moradi Biophysical Journal 121 (3), 324a, 2022 | 6 | 2022 |
Elucidating the molecular basis of spontaneous activation in an engineered mechanosensitive channel K Immadisetty, A Polasa, R Shelton, M Moradi Computational and Structural Biotechnology Journal 20, 2539-2550, 2022 | 6 | 2022 |
Developing a Rational Approach to Designing Recombinant Proteins for Peptide-Directed Nanoparticle Synthesis RBMM Adithya Polasa, Imann Mosleh, James Losey, Alireza Abbaspourrad Nanoscale Adv, 2022 | 5 | 2022 |
Elucidating the molecular basis of pH activation of an engineered mechanosensitive channel K Immadisetty, A Polasa, R Shelton, M Moradi bioRxiv, 707794, 2019 | 4 | 2019 |
Ins and outs of rocker switch mechanism in major facilitator superfamily of transporters S Sauve, J Williamson, A Polasa, M Moradi Membranes 13 (5), 462, 2023 | 3 | 2023 |
cpSRP43 is both highly flexible and stable: Structural insights using a combined experimental and computational approach M Benton, M Furr, V Govind Kumar, A Polasa, F Gao, CD Heyes, ... Journal of Chemical Information and Modeling 63 (13), 4125-4137, 2023 | 2 | 2023 |
Deciphering the Inter-domain Decoupling in the Gram-negative Bacterial Membrane Insertase A Polasa, M Moradi bioRxiv, 2022.08. 09.503346, 2022 | 2 | 2022 |
Binding affinity estimation from restrained umbrella sampling simulations VG Kumar, S Agrawal, TK Suresh Kumar, M Moradi bioRxiv, 2021.10. 28.466324, 2021 | 2 | 2021 |
Molecular dynamics investigation of the ph-dependent influenza hemagglutinin conformational change S Badiee, VG Kumar, A Polasa, M Moradi Biophysical Journal 121 (3), 39a, 2022 | 1 | 2022 |
Characterizing the roles of chemo-mechanical couplings in the differential behavior of SARS-CoV-1 and SARS-CoV-2 spike glycoprotein UH Isu, VG Kumar, M Derakhshani-Molayousefi, A Polasa, M Moradi Biophysical Journal 121 (3), 526a, 2022 | 1 | 2022 |
Comparing the Dynamic Differences between X-ray and Cryo-EM Structures of Cannabinoid Receptor 1 using Molecular Dynamics Simulations U Isu, VG Kumar, A Polasa, M Moradi Biophysical Journal 120 (3), 27a, 2021 | 1 | 2021 |
Computational Elucidation of Recombinant Fusion Protein Effect on Peptide-Directed Nanoparticles MM A. Polasa, I. Mosleh, J. Losey, A. Abbaspourrad, R. Beitle bioRxiv, 2021 | 1 | 2021 |
An Investigation of the YidC-Mediated Membrane Insertion of a Pf3 Coat Protein Using MD Simulations A Polasa, JJ Hettige, K Immadisetty, M Moradi Biophysical Journal 118 (3), 365a, 2020 | 1 | 2020 |
A purely physics-based computational binding affinity estimation from restrained umbrella sampling simulations A Polasa, VG Kumar, M Moradi Biophysical Journal 123 (3), 471a, 2024 | | 2024 |
Differential behavior of conformational dynamics in active and inactive states of cannabinoid receptor 1 revealed by microsecond molecular dynamics simulation UH Isu, A Polasa, M Moradi Biophysical Journal 123 (3), 15a-16a, 2024 | | 2024 |
Cholesterol Dependence on the Conformational Changes of Metabotropic Glutamate Receptor 1 UH Isu, SA Badiee, A Polasa, SH Tabari, M Derakhshani-Molayousefi, ... bioRxiv, 2024.04. 17.589854, 2024 | | 2024 |
Cholesterol dependence on the conformational changes of metabotropic glutamate receptor 1 (mGLuR1) U Isu, A Polasa, SH Tabari, M Derakhshani-Molayousefi, M Moradi Biophysical Journal 122 (3), 503a, 2023 | | 2023 |