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| Whole-organism clone tracing using single-cell sequencing A Alemany, M Florescu, CS Baron, J Peterson-Maduro, ... Nature 556 (7699), 108-112, 2018 | 404 | 2018 |
| Analysis of intronic and exonic reads in RNA-seq data characterizes transcriptional and post-transcriptional regulation D Gaidatzis, L Burger, M Florescu, MB Stadler Nature biotechnology 33 (7), 722-729, 2015 | 279 | 2015 |
| Neuromesodermal progenitors are a conserved source of spinal cord with divergent growth dynamics A Attardi, T Fulton, M Florescu, G Shah, L Muresan, MO Lenz, C Lancaster, ... Development 145 (21), dev166728, 2018 | 83 | 2018 |
| Massively parallel whole-organism lineage tracing using CRISPR/Cas9 induced genetic scars JP Junker, B Spanjaard, J Peterson-Maduro, A Alemany, B Hu, ... Biorxiv, 056499, 2016 | 59 | 2016 |
| Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis P Zeller, J Yeung, H Viñas Gaza, BA de Barbanson, V Bhardwaj, ... Nature Genetics 55 (2), 333-345, 2023 | 17 | 2023 |
| scChIX-seq infers dynamic relationships between histone modifications in single cells J Yeung, M Florescu, P Zeller, BA De Barbanson, MD Wellenstein, ... Nature Biotechnology 41 (6), 813-823, 2023 | 13 | 2023 |
| Massively parallel clonal analysis using CRISPR JP Junker, B Spanjaard, J Peterson-Maduro, A Alemany, B Hu, ... Cas9 induced genetic scars. bioRxiv 56499 (10.1101), 056499, 2017 | 12 | 2017 |
| 12 Grand challenges in single-cell data science D Laehnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... PeerJ Preprints, 2019 | 9 | 2019 |
| Hierarchical chromatin regulation during blood formation uncovered by single-cell sortChIC P Zeller, J Yeung, BA de Barbanson, HV Gaza, M Florescu, ... BioRxiv, 2021.04. 26.440606, 2021 | 8 | 2021 |
| Erratum: Analysis of intronic and exonic reads in RNA-seq data characterizes transcriptional and post-transcriptional regulation D Gaidatzis, L Burger, M Florescu, MB Stadler Nature Biotechnology 34 (2), 210-210, 2016 | 5 | 2016 |
| Deconvolving multiplexed histone modifications in single cells J Yeung, M Florescu, P Zeller, BA de Barbanson, A van Oudenaarden biorxiv, 2021.04. 26.440629, 2021 | 3 | 2021 |
| Single-cell ScarTrace J Peterson-Maduro, M Florescu, CS Baron, A Alemany, ... Protoc. Exch, 2018 | 1 | 2018 |
| Learning relationships between histone modifications in single cells J Yeung, M Florescu, P Zeller, BA de Barbanson, MD Wellenstein, ... NeurIPS 2022 Workshop on Learning Meaningful Representations of Life, 2022 | | 2022 |
| Cutting edge tools to reveal lineages and epigenetic modifications in single cells M Florescu | | 2020 |
| Correction: Neuromesodermal progenitors are a conserved source of spinal cord with divergent growth dynamics A Attardi, T Fulton, M Florescu, G Shah, L Muresan, MO Lenz, C Lancaster, ... Development 147 (17), dev195610, 2020 | | 2020 |
| ScarTrace: CRISPR/Cas9-mediated clonal tracing in zebrafish embryonic development and regeneration A Alemany, M Florescu, CS Baron, J Peterson-Maduro, ... EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 48, S133-S133, 2019 | | 2019 |
| Neuromesodermal Progenitors are a Conserved Source of Spinal Cord with Divergent Growth Dynamics BJ Steventon, A van Oudenaarden, J Huisken, C Lancaster, M Lenz, ... Springer Nature, 2018 | | 2018 |
| Single-cell ScarTrace A van Oudenaarden, J Peterson-Maduro, M Florescu, CS Baron, ... | | 2018 |
| Beyond MRNA Expression Profiling in RNA-seq: Measuring Transcriptional Changes Via Changes in Intronic Read Levels M Florescu Biozentrum, Universität Basel, 2014 | | 2014 |
