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Jordi Abante
Jordi Abante
Other namesJordi Abante Llenas
Biomedical Sciences / Mathematics and Computer Science @ Universitat de Barcelona
Verified email at ub.edu - Homepage
Title
Cited by
Cited by
Year
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 2674, 2019
2732019
Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae
C Qiu, H Jin, I Vvedenskaya, JA Llenas, T Zhao, I Malik, AM Visbisky, ...
Genome biology 21, 1-31, 2020
372020
An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data
G Jenkinson, J Abante, AP Feinberg, J Goutsias
BMC bioinformatics 19, 1-23, 2018
292018
Detection of haplotype-dependent allele-specific DNA methylation in WGBS data
J Abante, Y Fang, AP Feinberg, J Goutsias
Nature communications 11 (1), 5238, 2020
182020
A dysregulated DNA methylation landscape linked to gene expression in MLL-rearranged AML
MA Koldobskiy, J Abante, G Jenkinson, E Pujadas, A Tetens, F Zhao, ...
Epigenetics 15 (8), 841-858, 2020
152020
Ranking genomic features using an information-theoretic measure of epigenetic discordance
G Jenkinson, J Abante, MA Koldobskiy, AP Feinberg, J Goutsias
BMC bioinformatics 20, 1-17, 2019
142019
Converging genetic and epigenetic drivers of paediatric acute lymphoblastic leukaemia identified by an information-theoretic analysis
MA Koldobskiy, G Jenkinson, J Abante, VA Rodriguez DiBlasi, W Zhou, ...
Nature biomedical engineering 5 (4), 360-376, 2021
122021
Estimating DNA methylation potential energy landscapes from nanopore sequencing data
J Abante, S Kambhampati, AP Feinberg, J Goutsias
Scientific Reports 11 (21619), 2021
52021
DIVE: a reference-free statistical approach to diversity-generating and mobile genetic element discovery
J Abante, PL Wang, J Salzman
Genome Biology 24 (1), 240, 2023
42023
HiMMe: using genetic patterns as a proxy for genome assembly reliability assessment
J Abante, N Ghaffari, CD Johnson, A Datta
BMC genomics 18, 1-13, 2017
42017
DNA methylation entropy is associated with DNA sequence features and developmental epigenetic divergence
Y Fang, Z Ji, W Zhou, J Abante, MA Koldobskiy, H Ji, AP Feinberg
Nucleic Acids Research, 2023
32023
Promoter scanning during transcription initiation in Saccharomyces cerevisiae: Pol II in the “shooting gallery”
C Qiu, H Jin, I Vvedenskaya, JA Llenas, T Zhao, I Malik, AM Visbisky, ...
Biorxiv, 810127, 2019
32019
Computational considerations in transcriptome assemblies and their evaluation, using high quality human rna-seq data
N Ghaffari, J Abante, R Singh, PD Blood, CD Johnson
Proceedings of the XSEDE16 Conference on Diversity, Big Data, and Science at …, 2016
22016
CpelTdm.jl: a Julia package for targeted differential DNA methylation analysis
J Abante, J Goutsias
bioRxiv, 343020, 2020
12020
Disseny, control i implementació d'un inversor trifàsic per un vehicle elèctric
J Abante Llenas
Universitat Politècnica de Catalunya, 2014
12014
Assessing Tree-Based Phenotype Prediction on the UK Biobank
A Meléndez, C López, D Bonet, G Sant, DM Montserrat, J Abante, M Rivas, ...
2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2023
2023
STATISTICAL SIGNAL PROCESSING METHODS FOR EPIGENETIC LANDSCAPE ANALYSIS
J Abante Llenas
Johns Hopkins University, 2021
2021
What are the most influencing factors in reconstructing a reliable transcriptome assembly?
N Ghaffari, J Abante, R Singh, PD Blood, L Pipes, C Mason, CD Johnson
bioRxiv, 220269, 2017
2017
Fast, Flexible, and Free: Enabling Large-Scale Genome Assembly and Analysis with the Bridges Supercomputer
P Blood, N Ghaffari, AS Seetharam, L Pipes, R Singh, J Abante, ...
Plant and Animal Genome XXVI Conference (January 13-17, 2018), 0
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Articles 1–19